Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2968 ATGGAGAATCACATGGTGAAGGAGGAAATAGTGGAGGTGGTAGATGGAGAAGAAGTGGTAGAACATGATGAGGTGGGTGCCATTGGTGGTGGTGAAGATGAAGAAGATGTTGTTTCCACCTTGACCATGGAAAGGGTTGCTGCAGCTAAGAAATTCATTGAGAGTCATTATAAGTCTCAAATGAAACACATTCAAGAACGCAAAGAAAGGCGCTCGGTGCTACAAAAGGAGTTAGAATCTTCGCACGTACCAGAAGAAGAACAAATCAATTTACTGAAGGATTTAGAGAGCAAGGAGACTGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGATCTTCTAACCATTATTGGCAGGGGAGCCTTTGGTGAGGTAAGACTCTGTCGCGAGAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGAAATGTACTTGCAGAAGTTGTGAATGACTGCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATATTTACCTGGCGGCGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAAGTGTGGCTAGATTTTACATCGCCCAAACCGTTTTGGCCATAGAGTCAATTCATAAACACAATTACATTCATCGGGATATAAAACCTGACAACCTTCTGTTAGACATAAATGGTCATATGAAACTGTCGGATTTCGGTCTTTGCAAACCACTTGACTGCTCAAATCTATCATCTATAAGTGAAAATGAAATATTGGATGATGAGAACTTGAACGATACAATGGACGTTGATGGAAATCACCCGAATAGCAAAAATGGTAGGCGTTGGAAAAGTCCTCTTGAACAACTTCAACATTGGCAAATGAATAGGAGGAAGTTGGCATTTTCGACTGTGGGAACTCCAGACTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGCGTGGAGTGTGACTGGTGGTCTCTTGGCGCTATAATGTATGAGATGCTTGTCGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCAGAAAGATTGTGCACTGGAAAAACCACTTAAAATTTCCAGACGAGGCAAGATTGACACCTGAAGCTAAAGATCTGATGTGCAGGTTGCTCTCCGGTGTTCCACATAGGCTTGGTACAAGAGGAGCAAATGAAATTAAAGCTCATCCTTGGTTTAGAGATGTCATATGGGACAGGCTCTATGAAACCGAGGCAGCATTTAAACCGCGAGTCATTGGGGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAATCCCAGCTCGATCTGGATCCGGACCCATCAGAAAGATGCTCTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAGAATTTCGCTGCTGTCAAGGGGAAGCGCCATTCTATCGAAAAGGGAAGCGTGTCACCACGATCATCAGTGGACTCCACACACAGTGATTCTGTAATAAACTATTCCACCTGA 1572 0.4109 MENHMVKEEIVEVVDGEEVVEHDEVGAIGGGEDEEDVVSTLTMERVAAAKKFIESHYKSQMKHIQERKERRSVLQKELESSHVPEEEQINLLKDLESKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVVNDCIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLDCSNLSSISENEILDDENLNDTMDVDGNHPNSKNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEARLTPEAKDLMCRLLSGVPHRLGTRGANEIKAHPWFRDVIWDRLYETEAAFKPRVIGELDTQNFMKFDEVEQPIPARSGSGPIRKMLLTPQDLSFVGYTYKNFAAVKGKRHSIEKGSVSPRSSVDSTHSDSVINYST* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2968 523 Pfam Protein kinase domain 117 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2968 523 Pfam Protein kinase domain 314 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2968 523 Gene3D Phosphorylase Kinase; domain 1 441 451 - -
Mal4g2968 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 423 496 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal4g2968 523 ProSiteProfiles Protein kinase domain profile. 115 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2968 523 SUPERFAMILY Protein kinase-like (PK-like) 97 470 IPR011009 -
Mal4g2968 523 Gene3D Phosphorylase Kinase; domain 1 113 194 - -
Mal4g2968 523 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 33 512 - -
Mal4g2968 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Mal4g2968 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 512 - -
Mal4g2968 523 Gene3D Transferase(Phosphotransferase) domain 1 195 262 - -
Mal4g2968 523 CDD STKc_NDR_like 113 487 - -
Mal4g2968 523 SMART serkin_6 115 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2968 523 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Mal4g2968 523 SMART pkinase_C_6 423 488 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal4g2968 523 Gene3D Transferase(Phosphotransferase) domain 1 321 440 - -
Mal4g2968 523 MobiDBLite consensus disorder prediction 503 523 - -
Mal4g2968 523 MobiDBLite consensus disorder prediction 500 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2968 Mal-Chr4 88947507 88953043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2968 33 506 AGC Kinase Gene Family AT2G19400 75.891 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mal4g2968 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2968 K08790 - gmx:100811359 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2968 4 88947507 88953043 Mal4g2968 4 88947507 88953043 ECH