Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2967 ATGACACAACCTTCATTGTCTGTCTCTTCTAGCCTCACCTATGATGTTTTCCTCAGTTTTAGAGGCATAGATACCCGCAACAGTTTCACTGGTAACCTCTACAATTCTCTTGATCAAAAAGGATTTTCATTGTTGTTTTCTCTAACAACTATGCTTCCTCAACTTTTTTGTTTGAATGAACTTGTCATGATCCTTGAGTGTTCCCACACATATGGACGCTTGCTTGTGCCGGTTTTTTATGATGTTGATCCATCGCAAGTTCGCCACCAAAGTGGTGCTTATGGTGATGCTTTGAAAAAACATGAGGAGAGGTTTTGGGATGATAAGGTTAAGGTGCAAAAATGGAGGGATGCTTTATCTCAAGCTGCTAATGTTTCTGGCTGGCATTTCCAACATGGGTCACAATCAGAATACAAATTTATTGGAAATATCGTTGAGGAAGTCACTAAGAAGATCAATCGCACTCCTTTACATGTTGCTGATAACCCAGTTGCGCTAGAGTCACCAGTGTTAGAAGTGGCATCTCTTCTAGGGTTCGGATTTGATGAGGGAAACAACATGGTTGGCATTTATGGTGTCGGTGGTGTAGGTAAATCAACATTGGCTCGTGCGGTTTACAACCATATTTCTGATCAATTTGATGGTGTGTGCTTTCTTGCTGACATAAGAGAGAGTGCAATTAATCTTGGTCTTACGCAACTCCAAGAAACACTACTTTCTGAAATACTTGGTGAGAAGGATATTAGAGTGGGTAATGTTAACAGAGGAATTTCAATCATAAAAAGGAGGCTCCAAAGAAAAAAGGTACTTTTGGTTCTTGATGATGTTGACAAAGCGAAGCAGATACAAGTACTTGCAGGTGGACATGATTGGTTTGGCTCCGGCAGCAAGATCATAATCACTACGAGAGACAAACATTTGTTGGATATTCATGAGAATCTAAGTTTATACGAGGTTAAACAGTTGAATCATGAAAAATCTCTTGAATTGTTTAATTGGCATGCCTTTAGAAACAGCAAAATCGATCCATGTTATCGCGGTATTTCAAACCGCACAGTTTCTTATGCTAATGGCCTTCCATTGGCTTTGGAAGTGATAGGTTCTCACTTGTTTGGAAAAAGTTTAGATGTATGGAAATCTGCATTAGATAAATATGAAAGAACTCTTCATAAAGAGATTCATGAAATTCTCAAAGTTAGCTGTGATGATTTGGATGAAGATGAGAAGGGTATTTTTCTTGACATCGCTTGTTTCTTCAATTCTTATGAAATGGGCTATGCCAAAGAAATGTTATACCTACATGGTTTTAGTGCTGAAAATGGCATTCAAGTGCTGACCGACAAATCCCTCATAAAAATTGATGGCAATGGTTGTGTGAGAATGCATGACTTAGTTCAAGACATGGGCAGAGAAATCGTGAGGCAGGAATCAACTTTGGATCCTGGCAGACGCAGTAGATTATGGTTTGATGACGACATAATTCATGTTTTGGAAGAAAATACGGGAACTGATACAATTGAAGTCATAATCATCAACTTGTGCAATGACAAAGAAGTGCAGTGGAGTGGAAAAACCTTCAAGAAGATGAAAAACCTAAAAATTCTTATAATTAGAAGTGCACGCTTTTCTAGAGGTCCTCAAAAACTACCAAATAGTTTGAGAGTTCTGGACTGGAGTGGATACCCTTCACAATCTTTACCAGTCGATTTCAATCCTAAGAATCTTGTGATACTTAGCCTACCTGAAAGTTGCCTTATATCGTTCAAATCACTGAAGGTGTTTGAGTCCTTGAGCTTTCTAGATTTTGAAGGTTGCAAATTATTAACTGAGCTACCTAGCTTGTCTGGACTAGTGAATTTGGGGGCACTGTGTCTTGACGATTGCACTAATTTAATTACGATCCATAAGTCGCTCAGTTTTCTTGATAGACTTGTGTTATTGAGTACTCAAAGATGCAACCAGCTGGAACTTTTAGTTCCCTACATCAATCTGCCATCTCTAGAGACTCTAGATATGAGGGGTTGCTCGCGTCTCAAGAGCTTCCCTAAAGTATTGGGAGTAATGGAGAATATAAGAGATGTTTATTTAGACCAAACTTCCATAGATAAGTTGCCATTTTCAATTGGAAATCTTGTTGGCCTCCGACGATTGTTCTTGAGGGAATGCAAGAGCCTAACTCAGCTACCGGAAAGTATTCGTATATTGCCTAAACTTGAGATCATAATGGCTTATGAATGTAGAGGATTTCAATTGTTTGAGGATAAAGAAAAAGTGGGTTCAGAAGTGTTTCCAAAAGCCGTGCTTGTTTATAATGAAGGAAAGGAGACATTGCTTGATGTGTGTTCTCTTAACATATGTGCCAATAATGTCATAGAAGTATGTAAACCTTCGTTTGTCAGTAATGATTTCGGATTCGTGTTTAAAGGGATTTTTGAAGGGAGAGTAAATTGGTACCAGCAAGGAATCAATGAATCATCGTTATATTTTTGGTTTCGAAATAAACTCCCTCAGATAGCTCTATGTTGTGCCGGAGAACCTCCGATGTATAAAGACAATATGGTATTGGATTTCAAGTTGAGTGTACTCATTAATGGCATTAAGCAATTCAGTTCTTCATTTAACTACATGTTTTCTGCAGGAAGCATATCAGATCAAATACTTATGTGTGATTTAGTATGCAAAATGGAAAGATCATTTTTAGAACATGAATGGAATAAAGTAGAGATTTTATATGAGCTGAAATACCCTATGCCATATATCAAAGAGGATGTCAAATTTCTGTCTGAGTTTATGGAATGCAAAGAGGTTCAGAGAAGAAAGAAACACTGCTGGGTTTTCACTATATGCTCAAGCGCCATGGATTCAATTGGGCAGGGTTTTGATAGAAAAGATCAAGTGTGA 2901 0.3809 MTQPSLSVSSSLTYDVFLSFRGIDTRNSFTGNLYNSLDQKGFSLLFSLTTMLPQLFCLNELVMILECSHTYGRLLVPVFYDVDPSQVRHQSGAYGDALKKHEERFWDDKVKVQKWRDALSQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTPLHVADNPVALESPVLEVASLLGFGFDEGNNMVGIYGVGGVGKSTLARAVYNHISDQFDGVCFLADIRESAINLGLTQLQETLLSEILGEKDIRVGNVNRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHDWFGSGSKIIITTRDKHLLDIHENLSLYEVKQLNHEKSLELFNWHAFRNSKIDPCYRGISNRTVSYANGLPLALEVIGSHLFGKSLDVWKSALDKYERTLHKEIHEILKVSCDDLDEDEKGIFLDIACFFNSYEMGYAKEMLYLHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDMGREIVRQESTLDPGRRSRLWFDDDIIHVLEENTGTDTIEVIIINLCNDKEVQWSGKTFKKMKNLKILIIRSARFSRGPQKLPNSLRVLDWSGYPSQSLPVDFNPKNLVILSLPESCLISFKSLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLITIHKSLSFLDRLVLLSTQRCNQLELLVPYINLPSLETLDMRGCSRLKSFPKVLGVMENIRDVYLDQTSIDKLPFSIGNLVGLRRLFLRECKSLTQLPESIRILPKLEIIMAYECRGFQLFEDKEKVGSEVFPKAVLVYNEGKETLLDVCSLNICANNVIEVCKPSFVSNDFGFVFKGIFEGRVNWYQQGINESSLYFWFRNKLPQIALCCAGEPPMYKDNMVLDFKLSVLINGIKQFSSSFNYMFSAGSISDQILMCDLVCKMERSFLEHEWNKVEILYELKYPMPYIKEDVKFLSEFMECKEVQRRKKHCWVFTICSSAMDSIGQGFDRKDQV* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2967 966 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 57 690 - -
Mal4g2967 966 SUPERFAMILY "Winged helix" DNA-binding domain 391 498 IPR036390 -
Mal4g2967 966 SMART AAA_5 184 322 IPR003593 -
Mal4g2967 966 Gene3D - 7 51 IPR035897 -
Mal4g2967 966 Gene3D - 52 151 IPR035897 -
Mal4g2967 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 415 IPR027417 -
Mal4g2967 966 ProSiteProfiles TIR domain profile. 1 152 IPR000157 GO:0007165
Mal4g2967 966 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 43 - -
Mal4g2967 966 SUPERFAMILY L domain-like 508 754 - -
Mal4g2967 966 Pfam TIR domain 57 155 IPR000157 GO:0007165
Mal4g2967 966 Pfam NB-ARC domain 183 400 IPR002182 GO:0043531
Mal4g2967 966 PRINTS Disease resistance protein signature 263 277 - -
Mal4g2967 966 PRINTS Disease resistance protein signature 187 202 - -
Mal4g2967 966 PRINTS Disease resistance protein signature 356 370 - -
Mal4g2967 966 PRINTS Disease resistance protein signature 662 678 - -
Mal4g2967 966 Gene3D - 152 315 IPR027417 -
Mal4g2967 966 Gene3D - 321 405 IPR042197 -
Mal4g2967 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 690 IPR044974 GO:0006952
Mal4g2967 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 43 IPR044974 GO:0006952
Mal4g2967 966 SMART till_3 13 125 IPR000157 GO:0007165
Mal4g2967 966 Gene3D Ribonuclease Inhibitor 509 661 IPR032675 -
Mal4g2967 966 Gene3D Ribonuclease Inhibitor 662 765 IPR032675 -
Mal4g2967 966 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 128 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2967 Mal-Chr4 88937683 88942278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2967 4 757 WRKY Transcription Factor Family AT4G12020 34.051 6.73e-101 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2967 - - mtr:MTR_2g040370 1477.23