Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2951 ATGGAAGTTGCTGGTGGTGGTGGAGCTCCGTTTGACCCTCGAACTGTTGAAGCTGTTTTCCGTGACTTCAAAGGCCGTAGAGCTGGCTTGATCAAAGCTCTCACCACTGATGTTGATGAATTTTACCAGCAGTGTGATCCTGAAAAGGAGAATCTTTCTCTGTATGGATTTCCGGGCGAATTATGGGAAGTCACTTTACCTGCTGAAGAAGTTCCTCCTGAACTTCCAGAACCTGCATTGGGCATCAATTTTGCTAGGGATGGGATGCAAGAAAAGGACTGGCTATCTTTAGTTGCTGTTCACAGTGACACATGGCTTCTCTCTGTGGCTTTCTACTTCGGGGCAAGATTTGGCTTTGATAGAGCCGACAGGAAACGCCTTTTCACTTTGATTAATGATCTGCCGACAATATTTGAGGTTGTCACCGGAGCTGCAAAGAAGCAGACAAAGGAAAAGGAAAGGCCATCTGTCTCAAGTCACAACAGTAACAAGTCAAAGTCAGGTTCAAAAGCGCGTGGATCTGAACTGGCAAAGTATTCGAAGCCACCCAAAGAAGATGATGAGGGACTGGATGAAGAAGAGGAGGATCAAGGGGAGTGTGCTGCTTGTGGTGAAAGCTATGTATCTGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTATCATGGCAAATGTGTGAAGATCACTCCTGCTCGAGCGGAGCACATCAAGCAGTACAAGTGTCCTACATGCAACTATAAGAGAGTTCGTCCTTAA 768 0.4596 MEVAGGGGAPFDPRTVEAVFRDFKGRRAGLIKALTTDVDEFYQQCDPEKENLSLYGFPGELWEVTLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDTWLLSVAFYFGARFGFDRADRKRLFTLINDLPTIFEVVTGAAKKQTKEKERPSVSSHNSNKSKSGSKARGSELAKYSKPPKEDDEGLDEEEEDQGECAACGESYVSASDEFWICCDICEKWYHGKCVKITPARAEHIKQYKCPTCNYKRVRP* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2951 255 CDD PHD_AL_plant 200 251 IPR044104 -
Mal4g2951 255 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 10 255 - -
Mal4g2951 255 PANTHER CPG BINDING PROTEIN 10 255 IPR045104 GO:0006355|GO:0042393
Mal4g2951 255 Pfam Alfin 15 143 IPR021998 GO:0006355|GO:0042393
Mal4g2951 255 ProSiteProfiles Zinc finger PHD-type profile. 197 251 IPR019787 -
Mal4g2951 255 ProSitePatterns Zinc finger PHD-type signature. 200 248 IPR019786 -
Mal4g2951 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 249 IPR013083 -
Mal4g2951 255 SMART PHD_3 199 249 IPR001965 -
Mal4g2951 255 MobiDBLite consensus disorder prediction 148 193 - -
Mal4g2951 255 SUPERFAMILY FYVE/PHD zinc finger 189 252 IPR011011 -
Mal4g2951 255 Pfam PHD-finger 200 249 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2951 Mal-Chr4 88097039 88100570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2951 6 254 Alfin-like Transcription Factor Family AT3G42790 68.379 1.00e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Mal4g2951 Alfin 2.2e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2951 - - gmx:100500110 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2951 4 88097039 88100570 Mal4g2951 4 88097039 88100570 ECH