Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2918 ATGGCCGCTGCTGTCAACCTCATCCTCCTCCTTCTCTCTCTCTCCTCCCTCTCTCTCTCCACCGCAGCACCACCACCTTCTGAAGCACAATCCCTCCTTAAACTAAAACAATCCTTAACAAACTCAGACAAAAGCTTATCCTCATGGATCCCCAACGTCTCTCCATGTTCCGGTACATGGATCGGCGTTGTTTGTTTCAACAATATCATCACCGGCCTTCATCTCTCCGACCTTCAACTCTCCGGGACAATAGACGTCGACGCCATTGCCGAGATTCGAGGCCTAAGAACCCTCAGTTTCGTAAACAACTCCTTCTCCGGTCCCATTCCGCAGTTCAACAAACTCGGCGTCATAAAATCTCTTCTCCTCACACAAAACCAATTCTCTGGTCCAATTCCTGCAGATTTCTTCTCCCAGTTAACCTCCTTGAAAAAAGTATGGCTCTCCGGTAACAAATTCTCTGGCGATATTCCGGCTTCGTTAACGGAACTTGATCTTCTAAAAGAGCTTCATCTCGAAGGCAACGAATTTTCCGGTCAGTTGCCGAATCTTGAACAAGATTTCAAGTCATTCGACGTGTCGAATAACAATTTAGAAGGTCCGATTCCCGAGAGTCTCTCGAGATTCGGACCGGTTTCTTTTGCCGGAAATGAAAAACTGTGTGGAAAACCGTTGGAAAAACAATGTGACGGTTCATCTGGTTATTATTCGCTACCAGATTCTCAAGCAGAAAGTAACGGTTTCGGTTGGGTGCTTAAAGTGATAGGAATTATTGTTATGGCAGTTATAGTGGCGGTTATAATTCTGTTTGTGAAATCGAGGCGGCGAAGAAGAGAAGACGATTTTAGCGTGGTGAGCCGAGACAGCATTAAATTATTGTTACAGGTACACGTACCGATAAGTAGATCTTCATCTGCATCAGAGAGAGTTGGGAGACGACACGTGGGAGAATCTTCGAAGAGAGGAGGAATGGGGGGTGGGAGTAGAAATGGCATAGGTGATCTTGTGATGGTGAATGATGAGAAGGGTTCATTTGGTTTGCAAGATTTGATGAAAGCTGCTGCTGAGGTTTTGGGGAATGGTGGATTGGGATCGGCTTATAAGGCTGCGATGGGGACCGGGTTGAGTGTGGTTGTGAAGAGGATGAGGGAGATGAATAAAATTGGGAAAGATGTGTTTGATGCTGAGATGAGACAATTTGGAAGAATTAGACATGCTAATATTTTGACTCCTTTGGCTTATCATTATCGTAGAGAGGAGAAGCTTTTTGTTACTGAGTATATGCCTAAAGGAAGCTTGTTATACGTCTTGCACGGTGACAGAGGAACATCTCATTCAGAGTTAACATGGCCAATCCGTTTAAAGATAGCTAAAGGAATTGCAAGAGGGTTAAGCTTCCTTTACACTGAATTTTCTACCTATGATTTACCTCATGGAAACCTCAAATCAAGCAATGTTCTACTAACTGATGATTATGAGCCTCTATTAAGTGATTATGCTTTTCAACCACTAATTAACCCAAGCATTGCAGTGCAATCAATGTTTGCATATAAAACACCAGATTACATTCAAAACCAAAAGCTTTCGCAGAAAGCCGATGTTTATTGCCTCGGAATCATCATTCTTGAACTCCTTACAGGGAAATTCCCTTCGCAGTATCATAGTAATGGTAAAGGTGGTACTGATGTTGTTCAATGGGTCCTCACAGCAATTTCTGAGAGAAGAGAAGCTGAATTGATTGATCCTGAGTTACAAAATAATGCATCAAATTCAATCAATAATATGCTGCAACTTCTACTAATCGGCGCTGCTTGTACCGAAAGCAACCCAGAACAAAGAGTGCACATGAAGGAAGTTATTAGAAGGATAGAGGAGGTAAAACTCTGA 1887 0.4298 MAAAVNLILLLLSLSSLSLSTAAPPPSEAQSLLKLKQSLTNSDKSLSSWIPNVSPCSGTWIGVVCFNNIITGLHLSDLQLSGTIDVDAIAEIRGLRTLSFVNNSFSGPIPQFNKLGVIKSLLLTQNQFSGPIPADFFSQLTSLKKVWLSGNKFSGDIPASLTELDLLKELHLEGNEFSGQLPNLEQDFKSFDVSNNNLEGPIPESLSRFGPVSFAGNEKLCGKPLEKQCDGSSGYYSLPDSQAESNGFGWVLKVIGIIVMAVIVAVIILFVKSRRRRREDDFSVVSRDSIKLLLQVHVPISRSSSASERVGRRHVGESSKRGGMGGGSRNGIGDLVMVNDEKGSFGLQDLMKAAAEVLGNGGLGSAYKAAMGTGLSVVVKRMREMNKIGKDVFDAEMRQFGRIRHANILTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTSHSELTWPIRLKIAKGIARGLSFLYTEFSTYDLPHGNLKSSNVLLTDDYEPLLSDYAFQPLINPSIAVQSMFAYKTPDYIQNQKLSQKADVYCLGIIILELLTGKFPSQYHSNGKGGTDVVQWVLTAISERREAELIDPELQNNASNSINNMLQLLLIGAACTESNPEQRVHMKEVIRRIEEVKL* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2918 628 Gene3D Ribonuclease Inhibitor 188 232 IPR032675 -
Mal4g2918 628 Pfam Protein kinase domain 356 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2918 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 628 - -
Mal4g2918 628 MobiDBLite consensus disorder prediction 304 329 - -
Mal4g2918 628 PANTHER LRR RECEPTOR-LIKE KINASE 5 628 - -
Mal4g2918 628 CDD STKc_IRAK 358 625 - -
Mal4g2918 628 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mal4g2918 628 ProSiteProfiles Protein kinase domain profile. 352 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2918 628 Gene3D Phosphorylase Kinase; domain 1 329 427 - -
Mal4g2918 628 Gene3D Transferase(Phosphotransferase) domain 1 428 628 - -
Mal4g2918 628 SUPERFAMILY L domain-like 27 209 - -
Mal4g2918 628 Gene3D Ribonuclease Inhibitor 26 187 IPR032675 -
Mal4g2918 628 SUPERFAMILY Protein kinase-like (PK-like) 356 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2918 Mal-Chr4 84612671 84614984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2918 1 628 Receptor kinase-like Gene Family AT3G42880 49.922 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal4g2918 Pkinase 5.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2918 - - gmx:100790660 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5098 5 124723391 124725373 Mal4g2918 4 84612671 84614984 PCT