Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2912 ATGGAGAACAACTTGACAACAAAGAACCTTACAACTATGGATTTGCTCACTCCACAAGCTTCCTTGAACAATTCCAATGCTCTTAAGGGACCTAAAGCTGCACAATTGACAATGTTTTATAATGGTCAAGTTATTGTATTCGACGATTTTCCTGCCGATAAAGCACATGAGCTCATGGCTTTTGCTAACAAAGGAATCTCTCAAAGTCAGAACAATTCTGTGTACACTTACACACAGAGCCAGCCTTCATTTCCTCCTAGTTTGGTCAGAACTTCGGTTAACACAACCACTCCAATTGTTCCTACTGTGAACACCATCCCTAGCACTGCTACCGGCTCGATTCATGAACACCTTCAAGTGCCTTCCAGACCTAATGTTTGCGATCTTCCAATTATGAGGAAAGCTTCGCTTCATCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTGCCAATGCACCATATCAAGTTAATAAGCCAGCTGAATCCATGTCATGGCTTGTGGGAGCCAAATCAACTCAAATCTGA 525 0.4229 MENNLTTKNLTTMDLLTPQASLNNSNALKGPKAAQLTMFYNGQVIVFDDFPADKAHELMAFANKGISQSQNNSVYTYTQSQPSFPPSLVRTSVNTTTPIVPTVNTIPSTATGSIHEHLQVPSRPNVCDLPIMRKASLHRFLEKRKDRIAANAPYQVNKPAESMSWLVGAKSTQI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2912 174 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 166 IPR040390 -
Mal4g2912 174 Pfam tify domain 31 63 IPR010399 -
Mal4g2912 174 Pfam Jas motif 130 155 IPR018467 -
Mal4g2912 174 SMART tify_2 29 64 IPR010399 -
Mal4g2912 174 ProSiteProfiles Tify domain profile. 29 64 IPR010399 -
Mal4g2912 174 PANTHER PROTEIN TIFY 10A 4 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2912 Mal-Chr4 84457559 84459285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2912 32 166 Tify Gene Family AT1G19180 38.194 8.45e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal4g2912 tify 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2912 K13464 - gmx:100801449 213.001