Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2910 ATGGTGAAATCGAATGTGGAAAAAACTGCGGCGGAAAGAAGTGATTCTTCATCATTGTTTCGAGGAGTAAGGAAGAGAAAGTGGGGAAAATATGTGTCTGAAATTAGACTACCAAACAGCCGCCAGAGAATATGGTTAGGTTCTTATGACTCCGCCATTAAGGCGGCGCGTGCATTCGACGCAGCTATGTTTTGCTTACGTGGCAATAGTGCTAATTTTAATTTCCCTAATGATCCTCCGAACATTGCCGGAGGAAGGTCCATGACACATTCTGAGATTAAGGAAGCTGCAGCCCGTTTTGCCAATTCAGGTCGACCTGTTAAGGATTATTCAGGTCGACCTGTTAACACTTCGTCTTCATCGGAGGGGACGACAACAACATTGTTTCCTATAGAGTTGCCTTCTCCTGCTCTATCCGATGTGACGGTTCATACGGATAGTGATACAACAGAAAATGGATTGTTTAAGGACCTGTTTTCAGAAACCGGGTCAGGTTACTCTATGTTTCCGGGTTTTGATGATTTTTATGGCGATTTTTACGTGCCAGAGTTGACAAATTTTGATTATGAAGAAGATAACATGGATGGGTTGATAATACAGGATTCATTCTTATGGAATTTCTAA 624 0.4215 MVKSNVEKTAAERSDSSSLFRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAIKAARAFDAAMFCLRGNSANFNFPNDPPNIAGGRSMTHSEIKEAAARFANSGRPVKDYSGRPVNTSSSSEGTTTTLFPIELPSPALSDVTVHTDSDTTENGLFKDLFSETGSGYSMFPGFDDFYGDFYVPELTNFDYEEDNMDGLIIQDSFLWNF* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2910 207 Pfam AP2 domain 20 68 IPR001471 GO:0003700|GO:0006355
Mal4g2910 207 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Mal4g2910 207 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mal4g2910 207 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mal4g2910 207 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Mal4g2910 207 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mal4g2910 207 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 207 - -
Mal4g2910 207 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 3 207 - -
Mal4g2910 207 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Mal4g2910 207 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Mal4g2910 207 PIRSF PTI6 2 100 IPR017392 GO:0003700
Mal4g2910 207 PIRSF PTI6 89 202 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2910 Mal-Chr4 84422838 84423461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2910 14 207 AP2-EREBP Transcription Factor Family AT1G19210 47.596 1.41e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal4g2910 AP2 4.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2910 - - mtr:MTR_2g043040 297.745