Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2907 ATGGTGAAATCAAATGCGGCGGCGGAAAGAAGTGATTGTTCTTCATCATTGTACAGAGGAGTAAGGAAGAGGAAGTGGGGGAAATATGTCTCCGAAATAAGACTACCAAACAGCCGCCAAAGAATATGGTTAGGTTCTTATGACTCCGCCGTTAAGGCGGCGCGTGCATTCGACGCGGCTATGTTTTGCTTACGTGGCAGTGGTGCTAAATTTAATTTCCCTAATGATCCTCCGGACATTGCTGGAGGAAGGTCCATGACACATTCTGAGATTAAGGCTGCTGCAGCAAGTTTTGCTAATTCAGGTAGACCTGTTAACACTCCGGTTGAAACACCGTCTTCATCGGAGGGGACGACAACTGCATTGTTGCCTATCGAGTTGCCGTCTCCTGCTTTATCCGATGGGGCGGTTCAGACAGATAGTGATATAACAGAAAATGGATTGTTTAATGACCTCTTTTCCGGTTACTCTATGTTTCCGGGTGTTGATGATTTTTGTGGCGATTTTTACGTGCCGGAGTTGACAAATTTTGATTATGAAGAAGAGAACATGGATGGTTTGGTAATACAGGATTCATTCTTATGGAACTTCTAA 594 0.4444 MVKSNAAAERSDCSSSLYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAVKAARAFDAAMFCLRGSGAKFNFPNDPPDIAGGRSMTHSEIKAAAASFANSGRPVNTPVETPSSSEGTTTALLPIELPSPALSDGAVQTDSDITENGLFNDLFSGYSMFPGVDDFCGDFYVPELTNFDYEEENMDGLVIQDSFLWNF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2907 197 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Mal4g2907 197 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Mal4g2907 197 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Mal4g2907 197 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Mal4g2907 197 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
Mal4g2907 197 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Mal4g2907 197 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Mal4g2907 197 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 6 197 - -
Mal4g2907 197 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Mal4g2907 197 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2907 Mal-Chr4 84332667 84333260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2907 11 197 AP2-EREBP Transcription Factor Family AT1G19210 45.226 9.57e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g2907 AP2 4.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2907 - - mtr:MTR_2g043040 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2907 4 84332667 84333260 Mal4g2907 4 84332667 84333260 ECH