Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2906 ATGGTGAAATCAAATGTGGGAAAAATTGCGGCGGAAAGAAGTGATTGTTCTTCATTGTTTCGAGGAGTAAGGAAGAGGAAGTGGGGGAAATATGTGTCTGAAATAAGACTACCAAACAGCCGCCAGAGAATATGGTTAGGTTCTTATGATTCTGCTGAAAAGGCGGCGCGTGCATTCGACGCGGCTATGTTTTGCTTACGTGGCAGTGGTGCTAAATTTAATTTCCCTAATAATCCTCCGGACATTGCCGGAGGAAGGTTCATGACACATTCTGAAATTAAGGCTGCTGCAACCCGTTTTGCAAATTCGGGTCAACCCGATAATGAGTATTCGGGTTGGTCCGTTAATACTCCGACTGAAACACCATCTTCGTCCGAGGGAACGACGTCATCATTGTTGCCTACGGAGTCCCCATCTCCGGCACTCTCTGAGGCGACAGTTCAGGGAGATTATGATTTAAAGCAAAACGGGTTATTTTCGGATATGTTTTCTGAAATCGGATCAGGTTACTCTATGTTTCCGGGTTTTGATGATTTTTGCGGTGATTTTTACGTGCCAGAGTTGACAAATTTTGATTATGAAGACGAGAATATGGATGAGTTAGTAATTCAAGACCTGTTCTTGTGGAATTTCTAA 636 0.434 MVKSNVGKIAAERSDCSSLFRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGAKFNFPNNPPDIAGGRFMTHSEIKAAATRFANSGQPDNEYSGWSVNTPTETPSSSEGTTSSLLPTESPSPALSEATVQGDYDLKQNGLFSDMFSEIGSGYSMFPGFDDFCGDFYVPELTNFDYEDENMDELVIQDLFLWNF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2906 211 MobiDBLite consensus disorder prediction 100 143 - -
Mal4g2906 211 Pfam AP2 domain 20 68 IPR001471 GO:0003700|GO:0006355
Mal4g2906 211 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Mal4g2906 211 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mal4g2906 211 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mal4g2906 211 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mal4g2906 211 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Mal4g2906 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 211 - -
Mal4g2906 211 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Mal4g2906 211 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Mal4g2906 211 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 3 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2906 Mal-Chr4 84320911 84321546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2906 14 211 AP2-EREBP Transcription Factor Family AT1G19210 46.154 1.45e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g2906 AP2 6.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2906 - - mtr:MTR_2g043040 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2906 4 84320911 84321546 Mal4g2906 4 84320911 84321546 ECH