Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2899 ATGAAGGTTCCTTCTAATGGTTATTTGCCTAATTCTGGTGAAGGTGAAAGGAAGGCCATCAATTCAGAGTTATGGCATGCTTGTGCCGGGCCATTGGTTTCTATACCGCCTGTTGGAAGCCTTGTTGTTTACTTTCCTCAAGGACACAGTGAACAAGTTGCAGCATCTATGCAAAAGGAGGCAGACATCATACCAAGTTACCCTAACCTTCCATCCAAGTTGATCTGCATGCTTCACAATGTTGCCCTCCATGCTGACCCTGAAACTGACGAGGTCTATGCTCAGATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCAATGCTGGCTTCAGACATGGGTCTCAAACAAAACCAACAACCTACTGAATTCTTTTGCAAAACTCTAACAGCTAGTGACACTAGCACTCACGGAGGATTTTCAGTGCCTCGTAGAGCTGCTGAGAAAATATTCCCACCTCTGGACTTCTCAATGCAACCACCAGCTCAGGAAATAGTTGCCAAAGATTTACATGACACTACATGGACATTCAGACATATTTATCGGGGACAACCGAAGAGGCATCTATTGACTACTGGTTGGAGTGTCTTTGTTAGCACAAAAAGGCTCTTTGCTGGAGATTCTGTTCTTTTTATAAGAGATGAAAAGCAGCAACTTCTCTTAGGCATAAAGAGATCCAGTAGACAGCAACCAGCACTATCTTCATCGGTAATATCAAGTGACAGCATGCATATTGGCATTCTCGCTGCTGCGGCTCATGCTGCTTCGAATAACAGTCCGTTTACTGTATTTTATAATCCAAGGACTAGCCCCTGTGAATTTGTGATTCCATTGGCCAAGTATAATAAAGCACTGTACACACATGTTTCCCTTGGAATGCGATTCAGAATGATGTTTGAGACGGAGGATTCAGGAGTACGCAGATATATGGGCACAATCACTGGGATCAGTGACTTGGATCCTGTCCGCTGGAAAAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCGACTGCTGGTGACCGTCCAAGTAGAGTTTCAATTTGGGATATTGAACCAGTTGTGACTCCTTTCTACATTTGTCCACCTCCGTTTTTTAGGCCAAAGTTCCCGAAGCAACCAGGAATGCCAGAAGATGAGTCTGAAATCGAAAATGCATTCAAGAGAGCTATGCCATGGCTTGGAGATGAACTCGGAATGAAGGATAACTCAAGTTCAATCTTCCCTGGTTTGAGTTTAGTACAATGGATGAGTATGCAGCAAAATAATAATCAGTTTTCCGCTGCTCAGTCAGGACTTTTACCTCCATCCATGCTTTCGTCAAATGCAATGCACGGTAACCTTAACACCGATGATCCATCCAAGATATTGAACTTCCAGTCCCCTGCTGCGCTCTCTGCTCCAAGTCTTCAATTTAATAAACCTAATTTACCGAACCAAGTCAATCAATTGCAACAGCCCCCGACCTCATGGTCCCAGCAACAGCAACAGCAGCAGAAGATGCAGTCATTGTTGCAAACGCCGTTGAACCAGCTGCAGCAGCAACAACAGCAGCAGAGGCAACAGCAGCTGGCTGGACCACAAAATATGCAGCAGCCACAGCAGCAACAGCCTCAGCTGACTCAACAGAATTCGCAACAGCCTCAACAGCAGCAACAACACCAACAGCCATGTCAAAACGCGACTATGAATAACGGCACAGTTGGTTCTAACCAGATTCAGAATCAGTGTGTACAGCAACCAGTATCCTACTCTCAGCTTCAGCAACAGTTACTCTCGGGAAGTATCCAATCCCAACAAAATTTCCAATCAGCTGGCAAGAATGGAATGATAATGACATCCGTACCACAAGACTCGCAGTTTCATCAACAAATAGACCAACAACAAGCTGGTCTCTTACAGCGGCAGCAGCAACAGCAGCATAATCAGTTGCAACAATCTTCATTACAGTTATTGCAACAAAGCATGTTACAGAGGGCACCACAGCAACAACAAATGTCTCAAATTTCGCCGCAAAACATATCAGACCAACAACAACAGATGCAGTTGTTACAGAAGTTGCAACAGCAGCAACAACAGCAGCAGCAGCAACCACTTTCCACATCTTCCCCACTTTTGCAGTCTCAGCTTCTGCAGCAACAAAGCCAGCAATTGCCGCAGCTGCCTATGTCCCAGCATCAGCCCCAACAGCTCGGAAACAATGCATTCTCAATGGAGAAGCTTCTCAACAACAATTACTCTTCACCTCTCATGCATTCGCAGCAGCTTCCTGTGAACCATCTCCAGAATACGCAGAAATCACCGACAAACACGAGAGCTCCATCTGCTTTTACAGACGGAGATGCCCCATCATGCTCAACTTCGCCATCTACTAATAACTGTCAGACATCGCCTCCAAACCTTCTGAAAAGAAATCAACCAGACACGTTTGGAGGGCCTTCGATGGTTGAAACCACGAATAATCTGATGCAAGAGCTTCAAAGTAAGTCTGATATGCAGAACAAACTTGAATTACACGGCGTTAAAGGACCCGACAAGCAAAAGCACAAAGGTGTGATCAATGATCAGATGGAAGCTTCTTCTGGAACATCATACGGTATTGATCCTGGTAACATCCATCAGAACTTCCCACTTTCCAACTTCTACATGGATGGTGATGTACACGCACAACAACCTAGAAGTAATTTACCATTTTCTTCTAACCTTGATGGATTAACACCTGATCCTTTGCTCTCAAGAGGGTATGATTCTCAAAAAGATCTTCAAAATTTGTTGTCTAATTATGGTGGTGCTCCAAGAGACATTGAAACTGAGCTGTCGACTGCTGATATTAGTTCACAGTCGTTTGGGGTGCCGAACATGTCTTTTAAGCCAGGATGCTCAAATGATATTCCTATCGCCGATACTGGGGTTTTGAATAATGGTTTATGGTCTAATCAAAATCAACGAATGCGAACATATACTAAGGTTCAAAAATGTGGCTCAGTTGGAAGATGTATTGATGTCACCCGTTACAAAGGGTATGAAGAACTCCGGAATGATTTGGCTCGTATGTTTGGTATTGAAGGACAGCTAGAAGATCCTCTAAGGGTTGACTGGAAACTAGTATATGTGGATCACGAAAATGATATTCTTCTTGTCGGCGATGACCCTTGGGAAGAATTTGTAAACTGTGTCCAAAGCATAAAGATACTATCATCTGCTGAGGTACAACAAATGAGCTTGGAAGGGGATTTAGGTTATAATATTCCACCAATCACCAATCAAGCTTGTAGTGGATCAGAAAGTGGCAATGCATGGAGGGCACAGTATGATGATAACTCTGCAGCTTCATTTAATCGATAA 3354 0.4386 MKVPSNGYLPNSGEGERKAINSELWHACAGPLVSIPPVGSLVVYFPQGHSEQVAASMQKEADIIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAMLASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRSSRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTVFYNPRTSPCEFVIPLAKYNKALYTHVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGDRPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESEIENAFKRAMPWLGDELGMKDNSSSIFPGLSLVQWMSMQQNNNQFSAAQSGLLPPSMLSSNAMHGNLNTDDPSKILNFQSPAALSAPSLQFNKPNLPNQVNQLQQPPTSWSQQQQQQQKMQSLLQTPLNQLQQQQQQQRQQQLAGPQNMQQPQQQQPQLTQQNSQQPQQQQQHQQPCQNATMNNGTVGSNQIQNQCVQQPVSYSQLQQQLLSGSIQSQQNFQSAGKNGMIMTSVPQDSQFHQQIDQQQAGLLQRQQQQQHNQLQQSSLQLLQQSMLQRAPQQQQMSQISPQNISDQQQQMQLLQKLQQQQQQQQQQPLSTSSPLLQSQLLQQQSQQLPQLPMSQHQPQQLGNNAFSMEKLLNNNYSSPLMHSQQLPVNHLQNTQKSPTNTRAPSAFTDGDAPSCSTSPSTNNCQTSPPNLLKRNQPDTFGGPSMVETTNNLMQELQSKSDMQNKLELHGVKGPDKQKHKGVINDQMEASSGTSYGIDPGNIHQNFPLSNFYMDGDVHAQQPRSNLPFSSNLDGLTPDPLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTADISSQSFGVPNMSFKPGCSNDIPIADTGVLNNGLWSNQNQRMRTYTKVQKCGSVGRCIDVTRYKGYEELRNDLARMFGIEGQLEDPLRVDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLEGDLGYNIPPITNQACSGSESGNAWRAQYDDNSAASFNR* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2899 1117 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g2899 1117 Gene3D - 983 1077 - -
Mal4g2899 1117 Pfam AUX/IAA family 985 1074 IPR033389 -
Mal4g2899 1117 MobiDBLite consensus disorder prediction 765 807 - -
Mal4g2899 1117 MobiDBLite consensus disorder prediction 665 684 - -
Mal4g2899 1117 CDD B3_DNA 125 217 IPR003340 GO:0003677
Mal4g2899 1117 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Mal4g2899 1117 MobiDBLite consensus disorder prediction 765 819 - -
Mal4g2899 1117 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Mal4g2899 1117 SUPERFAMILY CAD & PB1 domains 1001 1066 - -
Mal4g2899 1117 Coils Coil 677 700 - -
Mal4g2899 1117 MobiDBLite consensus disorder prediction 471 570 - -
Mal4g2899 1117 Gene3D - 289 360 - -
Mal4g2899 1117 ProSiteProfiles PB1 domain profile. 988 1072 IPR000270 GO:0005515
Mal4g2899 1117 SMART B3_2 126 228 IPR003340 GO:0003677
Mal4g2899 1117 PANTHER AUXIN RESPONSE FACTOR 19 1 1104 - -
Mal4g2899 1117 Gene3D - 123 227 IPR015300 -
Mal4g2899 1117 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Mal4g2899 1117 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1104 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g2899 1117 MobiDBLite consensus disorder prediction 620 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2899 Mal-Chr4 84021742 84028942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2899 1 489 B3 DNA Binding Superfamily AT1G19220 81.595 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g2899 AUX_IAA 8.7e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2899 - K14486 gmx:100815277 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5090 5 124650171 124655894 Mal4g2899 4 84021742 84028942 PCT