Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2897 ATGGTGACGACGAAGAAGAATACCAAAACCCAAGTGGTGAAAAACAAAGAAACCGATAAGAAGAAGAAAACCGTTAGTGATGGAACCAACAAAGAAGACAATAACAACAACGTTTTTGCTTCTTGTTCCTTTTCTAGCCTTGGTCTTCATCCAACCTTATGCGACCAACTTCGCGAAAGAATGGGTTTTGAAGGTCCAACATTAGTTCAAGCTCAAGCTATTCCTGTTGTTCTCTCTGGCCGTCATGCACTGGTTAATGCTGCTACAGGCACAGGGAAGACTATTGCATACCTGGCTCCAATTATTCATCACTTGCAGAGTTATGATAAGCGGATTCAGCGCTCCGATGGAACATTTGCGTTGGTTCTTGTACCAACGCGTGAGTTATGTTTGCAGGTTCATGAAATTCTTCAGAAGTTGCTGCACCGGTTTCATTGGATTGTTCCAGGATACATTATGGGTGGTGAAAGTAGATCGAAGGAGAAAGCCAGGCTGCGTAAAGGCATATCAATTCTTATTGCAACTCCTGGGCGCCTTTTAGATCACTTGAAGAACACATCATCATTCGTGTACACAAATTTACGCTGGATAATTTTTGATGAAGCAGATCGTATTTTGGAATTAGGATTTGGAAAAGAGATACAAGAAATACTAAATCTTTTAGGTTCAATGAAGACAGGGCACGATGACCAAGAGAATGGAGTTCCAAAACCCTCTAAATTTCAAAGACAAAACCTGCTTTTATCAGCGACCTTAAATGAGAAAGTAAACCACCTTGCCAAAATTAGCTTAGAGGATCCAGTGATGATTGGTATTGATGATAAAGTAATGGAACCAACATCAAAAATTAGATTTGATAATTCAGATTGTGATGAAGACAATGAAGACACGTATTCCAGTAAAGTACCAGCAGCAGTTGGAGCTTATAAAGTGCCCGAGCAGTTGATTCAGAGATACATGAAGGTGCCTTGTGGATCACGGCTTGCTATACTTCTTTCTATTCTAAAGCATCTTTTCGAAAGGGAACCTTCACAGAAGGTTGTGCTATTCTTTTCAACATGTGATGCAGTGGACTTTCATTATTCATTGTTAACCGAATTCCTTTTTTCATCGTATCCACAAACCGAAGAAGGGAACAGACCAATGTTTCTTGAATGCAAAACTCTCCGGCTACATGGTAATATGCAACAAGAGGACAGGACAACCAGTTTTCAAGCCTTTAAAACTGAGAAATCTGCCCTTCTTTTGTCTACTGATGTTTCTGCCAGAGGCTTAGATTTTCCAAATGTTAGATGCATCATACAATATGATTCTCCTGGAGAAGCTACTGAATATGTGCACAGAGTTGGAAGAACTGCTCGACTTGGTGAAAGAGGAGAGTCATTGTTATTTCTGCAACCATCTGAAATAGACTATTTACAAGACTTGGAGAAACATGGTGTCTCACTAGCAGAGTATCCTCTCCTCAAAGTGTTGGATAGTTTCCCACTGTCTGCACACAAGAACAATGTAAAGAAATCTGTTTTCATAGACATGCATCCATGGATCATGTCTCTCCAGAAGGCACTTGAGTCCTGCATCTCGTCTAAGCCCAAAATGGAAGAACTTGCCAAGAGAGCATTTTGCTCTTGGGTCCGTGCATACACAGCGCATCGTGGGGAGCTGAAAAGAATTTTTATGGTTAAGAAACTTCACTTAGGGCATGTAGCAAAAAGCTTTGGATTGAAACAAATACCCTCCTTAGTTGGAAAGTCTTTCCAAAACCAAACTAAGAAGAGGAAGAGATTTGAGAAGAAAAATGGGCCATCGAATAAGAGAAAAGTTGCACGACGTGTGACGTAA 1842 0.405 MVTTKKNTKTQVVKNKETDKKKKTVSDGTNKEDNNNNVFASCSFSSLGLHPTLCDQLRERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRIQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQENGVPKPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKVMEPTSKIRFDNSDCDEDNEDTYSSKVPAAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKVVLFFSTCDAVDFHYSLLTEFLFSSYPQTEEGNRPMFLECKTLRLHGNMQQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPSEIDYLQDLEKHGVSLAEYPLLKVLDSFPLSAHKNNVKKSVFIDMHPWIMSLQKALESCISSKPKMEELAKRAFCSWVRAYTAHRGELKRIFMVKKLHLGHVAKSFGLKQIPSLVGKSFQNQTKKRKRFEKKNGPSNKRKVARRVT* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2897 613 CDD DEADc_DDX31 53 271 - -
Mal4g2897 613 PANTHER ATP-DEPENDENT RNA HELICASE DDX31-RELATED 25 605 - -
Mal4g2897 613 CDD SF2_C_DEAD 315 465 - -
Mal4g2897 613 SMART ultradead3 62 284 IPR014001 -
Mal4g2897 613 MobiDBLite consensus disorder prediction 589 613 - -
Mal4g2897 613 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 198 206 IPR000629 -
Mal4g2897 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 271 IPR027417 -
Mal4g2897 613 Pfam Helicase conserved C-terminal domain 333 456 IPR001650 -
Mal4g2897 613 Gene3D - 325 607 IPR027417 -
Mal4g2897 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 472 IPR027417 -
Mal4g2897 613 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 74 270 IPR014001 -
Mal4g2897 613 Pfam Domain of unknown function (DUF4217) 520 580 IPR025313 -
Mal4g2897 613 Gene3D - 3 273 IPR027417 -
Mal4g2897 613 PANTHER RNA HELICASE 25 605 - -
Mal4g2897 613 SMART DUF4217_3 518 583 IPR025313 -
Mal4g2897 613 MobiDBLite consensus disorder prediction 1 32 - -
Mal4g2897 613 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 334 503 IPR001650 -
Mal4g2897 613 Pfam DEAD/DEAH box helicase 68 258 IPR011545 GO:0003676|GO:0005524
Mal4g2897 613 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 42 71 IPR014014 GO:0003724
Mal4g2897 613 SMART helicmild6 358 456 IPR001650 -
Mal4g2897 613 MobiDBLite consensus disorder prediction 10 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2897 Mal-Chr4 83909222 83915339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2897 16 487 Eukaryotic Initiation Factors Gene Family AT1G72730 24.790 2.79e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2897 K14806 - gmx:100805157 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2897 4 83909222 83915339 Mal4g2897 4 83909222 83915339 ECH