Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2856 ATGGGTTCAAGATCTGTGGAAGGAGAACAATCATCACTCGCTGACGATTATGATGCCTTAATTTCAACCACTGATGTTGAGCTTCTCAAGCGAGCTTGGCGTAATGAAAAGGCAGCCCCCGAGATTCTTCGTTTTGAATCTGATTTGATCACCCGTGTCAAAGAACAGATTGAATTGATGGAAGAAACTGTGGAGGAGAAATCTTCTGTAGGTACTGACCCTCTTTCAGTATCTCTGTATCAGATGGACTTAGATAGAACCCTGTTTCTATTAAGGTCATATCTTCGCATCCGCATCCTGAAGATCGAAAAGTACATGTTCCACATCCGAAAAACTCAAGAACTTTGGAACAGGCTTTCTAAGGATGAGAAATTTTTCACTGAAAGGTGCACAGATGACCTAAAGGAACATCTGGAGGGAAGTGTTCTATCAAAACTGCCTGAAAATTATCAGTCTTATGAGAGACAATCTGTGATTAGTGAAGAGGATGACATGGTTCCAGAACCACGACTAGACACATTTGTATTGTGTAGAAGTAAAGAATATCTCACTGGCATTCAACTTGAAGATGGACCTGTTGATGACAGGTCGAAGCTGTTTGAAATGGAGCCTGATGTCCTTTACTTCATATGTTACAAATCGATAAAGCCACTTGTAGAAAGTGGCAAAATTGATCTACTATGA 684 0.405 MGSRSVEGEQSSLADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLITRVKEQIELMEETVEEKSSVGTDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLSKDEKFFTERCTDDLKEHLEGSVLSKLPENYQSYERQSVISEEDDMVPEPRLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2856 227 PANTHER SLD5 PROTEIN 10 227 IPR008591 GO:0006261
Mal4g2856 227 SUPERFAMILY PriA/YqbF domain 171 227 - -
Mal4g2856 227 Pfam DNA replication complex GINS protein SLD5 C-terminus 169 227 IPR031633 -
Mal4g2856 227 CDD GINS_A_Sld5 25 143 IPR038749 -
Mal4g2856 227 PIRSF GINS_Sld5 1 227 IPR008591 GO:0006261
Mal4g2856 227 SUPERFAMILY GINS helical bundle-like 22 157 IPR036224 -
Mal4g2856 227 Gene3D - 12 217 - -
Mal4g2856 227 Coils Coil 50 70 - -
Mal4g2856 227 Pfam GINS complex protein 55 124 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2856 Mal-Chr4 82157875 82161291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2856 1 174 Core DNA Replication Machinery Family AT5G49010 60.920 3.43e-67 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2856 K10735 - gmx:100784291 344.354