Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2844 ATGGCTCCGGAGACAAGAGGTAGAAGAAGAAACATAGCTCCGGCAGAGGTTATCGACCTCGAATCATTCTGCTCTTCCGGCAAACGACCAATCTCCGACGTCATCAACCTTTCTGATAAAGAAGAAGACGACGACATTAAGATCATCAATTTCATTCCAAAAAATACCCCTGATGGAAAGAGTAAAAGAAACAAGTTTGAAAAAGGAGAGTCTTCAAATTCAAGTAACACTCCATTCTTTTGCGAAATTTGCATGGACACTAAAACAATGAAGGACGCTTTCTACTTCAGTGGTTGCTCTTACGCGTATTGCTCCGATTGTGTGGCATCATACATAGGTTCCAAACTCGAAGATAACATCGTTAATATTCGGTGTCCTGTTCCAAAGTGCAAAGGTTCGTTGGAAGCGGAGTTTTGCAGTTCAATTCTCCCGGCTGAGGTTTTTGAACGGTGGTGTGAGTTGTCATGTGAGGCTTTGTTCAATGTTTCGGAAAAATTCTACTGCCCTTTCGCAGACTGTTCTGCTCTTTTGATCAACGACGGAATGAAGGCTGTTAAAAATTCAGAATGTCCTAATTGTAATAGGATGTTTTGTGCACAGTGTATGGTTCCATGGCACGAAGGAATCGAATGCAGTGAGTTCGAGAAGCTGAATGCGGATGATATGGAGAAAGAAGATGATATGTTTATGCACTTTGTTAAGGATAAGGAGTGGAGGAGATGTCCCAAATGCAGAATTTATGTTGCCAAATCTGAGGGCTGCCTCAGCATGACTTGCAGGTGCTTTTTCTATTTTTTTTTTACGTTAAGGCCATTCTTGCTTATATCCGTCCATTTTGAATAA 843 0.414 MAPETRGRRRNIAPAEVIDLESFCSSGKRPISDVINLSDKEEDDDIKIINFIPKNTPDGKSKRNKFEKGESSNSSNTPFFCEICMDTKTMKDAFYFSGCSYAYCSDCVASYIGSKLEDNIVNIRCPVPKCKGSLEAEFCSSILPAEVFERWCELSCEALFNVSEKFYCPFADCSALLINDGMKAVKNSECPNCNRMFCAQCMVPWHEGIECSEFEKLNADDMEKEDDMFMHFVKDKEWRRCPKCRIYVAKSEGCLSMTCRCFFYFFFTLRPFLLISVHFE* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2844 280 SUPERFAMILY RING/U-box 155 216 - -
Mal4g2844 280 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 31 266 - -
Mal4g2844 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 163 IPR013083 -
Mal4g2844 280 Pfam IBR domain, a half RING-finger domain 150 211 IPR002867 -
Mal4g2844 280 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 31 266 IPR031127 GO:0004842|GO:0016567
Mal4g2844 280 Gene3D - 166 213 - -
Mal4g2844 280 ProSiteProfiles TRIAD supradomain profile. 77 280 IPR044066 -
Mal4g2844 280 SUPERFAMILY RING/U-box 226 265 - -
Mal4g2844 280 Gene3D - 214 268 - -
Mal4g2844 280 SUPERFAMILY RING/U-box 76 162 - -
Mal4g2844 280 ProSiteProfiles Zinc finger RING-type profile. 81 129 IPR001841 -
Mal4g2844 280 SMART ibrneu5 149 211 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2844 Mal-Chr4 82022925 82023767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2844 10 268 C3H Transcription Factor Family AT2G19610 26.937 4.78e-20 87.4