Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2833 ATGGGAAACACCAATTCTCCACCAAACAACACTTCCTCACACAACCTTCTCATCACCGTAACCGTTTTCGCCGTTACCGTCACCGTTCTCTTCATTTTCTACTGCATCCTCCGTCGCCGCCGTTTCTCTCCGTCATCCTCCTCCACTCTTTTCTCCTCTGCCAATAGAATCTCACCGGAAACCACTTCATCTTCCATCGTTGATTCTCTTCCGATTTTCACATTCTCCTCCATCACACGCCGTTCCTCCACTGTCATCTCCGCCGACTGTGCCGTTTGCTTATCGAAGTTCGAGCAAACCGATCAACTCCGTCTCCTACCTCTCTGCTGTCACGCATTCCATACGGAATGCATCGACACTTGGTTAGGATCGAATCAATCTTGTCCGCTATGTCGATCATCGGTTTTCGCTTCGGAATCGGAGGTTATGAAGCTTTTCCGTCCGTCCTCCGCTTCTTCCGGCAACAACAGCTTTCGGTTGGAGATAGGAAATGTCAGTAACCGTCGTGAAGGCGGCGCCGGCGCCATCGCAACTGACAATGTCGCCGGTGAAACTAACCAGAGATCTTACTCCGTTGGCGCGTTTGAGTATTTTGTTAATGAGGAAGCTGAGATTCCGTTTGGAAATACTAATCGGAGAGTTTTTCCCGGTGAAAAAGATGATGCGGCGGTGCTGGAGGTGGAGGCTCCGGTGGTTTCTCAGGCGAGTTTGGTTAATGAAGGTAACTGGTTGAAGGATTATGTTGATAATCTTTCAAGAGTGATGTCGTTTAGAGGTTCTGGAAGATTCTTTACTGGGAGTAGTAGACGAAACGACGTCGTTGCTGGTGTTGAAGATTTTGATGTTGAAGCTAACGCTAATGGATTTGGGGAAGAGATTAGCGAGATGTTTAGGTGGATTTCAGGGGTTTGA 912 0.4836 MGNTNSPPNNTSSHNLLITVTVFAVTVTVLFIFYCILRRRRFSPSSSSTLFSSANRISPETTSSSIVDSLPIFTFSSITRRSSTVISADCAVCLSKFEQTDQLRLLPLCCHAFHTECIDTWLGSNQSCPLCRSSVFASESEVMKLFRPSSASSGNNSFRLEIGNVSNRREGGAGAIATDNVAGETNQRSYSVGAFEYFVNEEAEIPFGNTNRRVFPGEKDDAAVLEVEAPVVSQASLVNEGNWLKDYVDNLSRVMSFRGSGRFFTGSSRRNDVVAGVEDFDVEANANGFGEEISEMFRWISGV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2833 303 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 4 273 - -
Mal4g2833 303 SUPERFAMILY RING/U-box 66 137 - -
Mal4g2833 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 137 IPR013083 -
Mal4g2833 303 CDD mRING-H2-C3H2C2D_ZSWM2 90 132 - -
Mal4g2833 303 Pfam Ring finger domain 89 132 IPR001841 -
Mal4g2833 303 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Mal4g2833 303 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 273 - -
Mal4g2833 303 SMART ring_2 90 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2833 Mal-Chr4 81435316 81436227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2833 65 137 C3H Transcription Factor Family AT2G18650 53.425 9.71e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2833 K10663 - gmx:100804962 292.737