Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2831 ATGGCTCTGGTTAATGTAGTACATCTTTTGTTCTCTCATTATACAGTGCTACTGCTACTTGTTTTAACTAGTAAAGGAAATGGACACGGTAATGATTGTCCATACTCATTTGATTGTGGAAATCTTGGGTTGATTCACTACCCTTTTACCACGGCTGAATTCCCCAACTGTGGTGCATTGGCAATTCAAGGTTGTGATGATTTCAACAAAACTTCTTTGAAGAGCATCCAATTAACCAAAGGAGGAAGACACTTTCAAATTACAACCATTGATAATAAATTGTCCATGGGCAACCCTATTACCATTATTGACCCGAATTTAACCAAACTTTTGCAGAAAATGCTTGTGAGGCCTTTAGCTATGATAATATTGCACTCTCTCCTTCCTCTCCTTTTGGAACTTTCGGTCATCGTGGCTTTTGGAGTTGCAGTGTTGATCTTGTTGGCATGCTGCATGAGGACAAAGATCTTCCCTCCAGAATTTCTTTTGTTCAGGAAGGAGTGTTCAACCCATCAAATTATTGAGGAGTTTATAAAAGAACATGGACCTCTTCCAGCAGCTAGGTACAATTATTCAGATGTCAAGAAAATAACACACTCTTTTAGAAACAAATTAGGCCAAGGAGGGTTCGGAAGTGTATACAAAGGAAAGTTACATGATGAGCGTGTTGTTGCAGTGAAGGTTTTAAGTGAATCAAAAGGTGATGGTGAAGATTTCATTAATGAAGTTGCGAGTATCAGTAGAACTTCGCATGTCAACGTTGTTAGACTTTTGGGATTCTGTTTGGATGGCTCTAAAAAGGCACTAATATACGAATTCATGCCTAATGGATCGCTTGAGAAGTTGATATACGAAGAGAAAAATCCATTGAAGGATGATCGCCAATTGGATTGCAAAACATTGTATGATATTGCAGTTGGCGTTGCTCATGGATTAGAGTACTTGCACACAGGCTGCAACACTAGAATCTTACATTTTGACATAAAACCTCATAATATATTACTTGATGAGGACTTCTGCCCAAAAATTTCAGACTTTGGGCTTGCTAAAATATGTCCAAGAAAAGAAAGCACTGTATCCATATTTGGTGCAAGGGGAACACCAGGATATATTGCTCCAGAGTTGTTCTCCAGAAACTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTTTTAGAAATGGTTGGTCGAAGAAAGAATATCAAAGTTGAAGTGGATTGTTCTAGCGAGTTGTATTTTCCACACTGGATTTACAAGCGCCTTGAATTGAATCAAGATCTTGGACTCAAGTGTATTAAAAATGAAGTTGATGACGTAATGGTAAGAAAAATGACAGTTGTGAGTTTATGGTGCATACAAACTGACCCTTCAAATCGACCAGCAATGCATAAAGTAGTGGAAATGCTGGAAGGGAGCCTTCAAGTGCTGGAAATACCACCCAAACCCTTTTTGTCTTCTCCTTCCACATCTTCGATCCATTTATCATCTGAAATATTGTAA 1515 0.3848 MALVNVVHLLFSHYTVLLLLVLTSKGNGHGNDCPYSFDCGNLGLIHYPFTTAEFPNCGALAIQGCDDFNKTSLKSIQLTKGGRHFQITTIDNKLSMGNPITIIDPNLTKLLQKMLVRPLAMIILHSLLPLLLELSVIVAFGVAVLILLACCMRTKIFPPEFLLFRKECSTHQIIEEFIKEHGPLPAARYNYSDVKKITHSFRNKLGQGGFGSVYKGKLHDERVVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKLIYEEKNPLKDDRQLDCKTLYDIAVGVAHGLEYLHTGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESTVSIFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLKCIKNEVDDVMVRKMTVVSLWCIQTDPSNRPAMHKVVEMLEGSLQVLEIPPKPFLSSPSTSSIHLSSEIL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2831 504 ProSitePatterns Protein kinases ATP-binding region signature. 205 227 IPR017441 GO:0005524
Mal4g2831 504 Pfam Protein kinase domain 202 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2831 504 SUPERFAMILY Protein kinase-like (PK-like) 184 475 IPR011009 -
Mal4g2831 504 ProSiteProfiles Protein kinase domain profile. 199 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2831 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Mal4g2831 504 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 7 114 - -
Mal4g2831 504 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 127 502 - -
Mal4g2831 504 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 114 IPR045874 GO:0004672
Mal4g2831 504 PANTHER RUST RESISTANCE KINASE LR10-RELATED 127 502 IPR045874 GO:0004672
Mal4g2831 504 Gene3D Phosphorylase Kinase; domain 1 176 273 - -
Mal4g2831 504 Gene3D Transferase(Phosphotransferase) domain 1 274 482 - -
Mal4g2831 504 SMART serkin_6 199 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2831 Mal-Chr4 81406985 81409492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2831 188 490 Receptor kinase-like Gene Family AT4G18250 59.486 6.62e-126 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal4g2831 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2831 - - cam:101505872 634.024