Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2829 ATGGCGTTTGAAGATTTTGATATCGTCTCAGAAAGGCGAAAAGCCAACGCAAAAACACACCTTAAGAAAAAGATTATAGTGGGGGTAACTTCCGCTGTTCTCGTAGCATGTGTTATAGCAGCTGCAACATTTGTTATTGTCAAAAGATCAGGACCAGATCACAATGCGAAACCAGTTTCAAACACACCATCTGAAGCTGCGGCGCGTGTTAATAAATACTCGAGACTTGTGAAAATGTTGTGCAGCAATTCAAAATACAAGGAAAAATGCGAAACCACACTTAAAGAGGCATTGAAAAAAGACCCTAAGTTGACAGAACCAAAGGATCTTCTAATGGTTTCCATGTTAGTTGCGGAGAATGAAATTAACAAGGCATTCAATGAAACCGCAAATTTGAAATTCGCTTCCAAGGAAGAAAAGGGAGCTTACGACGATTGTAAACAGTTGTTTGCAGATGCTAAAGAAGAAATGGGATTCTCAATCACTGAAGTTGGTCAACTTGATATGAGCAAACTATCTTCAAAAGAAGCTGAGCTAAACAACTGGCTTAGTGCTGTTATTTCTTACCAACAAACTTGCGTTGATGGTTTCCCCGAAGGAGAAATGAAGAAAAAGTTGGAGAAGATGTTTGGTGAATCAAGGAAACTTCTGAGTAACTCCCTCGCCGTTGTTTCACAGGTTTCTCAAATTGTTAATGCATTCCAAGGTGGAATTTCAGGATTCAAATTACCTTGGGGTAAAACAGATAAAGATGCTGCCGCTCCAGCTGCTGATGCTGCCGATGATGCTGCTGATGATGATGTTGCTGCTCCTGCCGGTTCTCCAGGTGCTGAACCTGATGTTATTGAGTTGCCTGGATCAACTGAGAAACCTAAACCTAATGTAACTGTTGCTAAAGATGGTAGTGGAGACTTCAAAACCATCTCTGAAGCTTTGGCTGCTATTCCAAAAACATACGATGGAAGGTACGTTGTTTATGTTAAGGAAGGAGTATACGATGAGACGGTTACAGTGACAAAGAAAATGGTGAACCTTACCATGTATGGTGATGGTGGTTTAAAGAGTATCGTAACAGGCAACAAAAACTACGTTGATGGAGTCAGAACTTTCCAAACTGCATCATTCGTGGTACTTGGAGAAGGATTCTTAGGCAGAGACATGGGATTTAGAAACACAGCCGGTGCCATAAAGGAACAAGCTGTGGCCGCCAGAGTCCAAGCAGATTGCGCCGTATTCCTCAACTGCAACTTCGAAGGTTACCAAGACACACTATACGCACAAACCCACAGACACTTCTACCGCGACTGTGTCATTTCCGGCACAATCGATTTCATCTTCGGCGACGCCTCTGCAGTCTTCCAAAACTGCCAAATTGTTCTTAGAAAGCCACTCAGCAACCAAAAAAACATCATCACCGCAAATGGAAGACTCGACTCACAAGAAAAAACCGCATTCGTCTTACAAAAATGTGTCATCAAGGGTGAACCTGATCTTCCTCCAACAACCAAGAACTACCTTGGAAGACCATGGAAGGAATATTCAAGAACAATTATCATGGAATCTGACTTTGGTACATTGATTCAACCTGAAGGTTGGTTACCTTGGGAAGGTGATTTTGCATTAAAAACATTGTATTATGGTGAGTTTAACAATGTTGGAGCTAGTGCTAAGACTGATGCTAGAGTTAAGTGGATTGGACGCAAAGATATCAAAAGGGAAGAGGCTCGAACATATACTGTTGAACCATTCTTGGATGGGTCATGGATCAATGGTACTGGTGTCCCAGCTCACTTGGGATTGTACGGTTGA 1809 0.4201 MAFEDFDIVSERRKANAKTHLKKKIIVGVTSAVLVACVIAAATFVIVKRSGPDHNAKPVSNTPSEAAARVNKYSRLVKMLCSNSKYKEKCETTLKEALKKDPKLTEPKDLLMVSMLVAENEINKAFNETANLKFASKEEKGAYDDCKQLFADAKEEMGFSITEVGQLDMSKLSSKEAELNNWLSAVISYQQTCVDGFPEGEMKKKLEKMFGESRKLLSNSLAVVSQVSQIVNAFQGGISGFKLPWGKTDKDAAAPAADAADDAADDDVAAPAGSPGAEPDVIELPGSTEKPKPNVTVAKDGSGDFKTISEALAAIPKTYDGRYVVYVKEGVYDETVTVTKKMVNLTMYGDGGLKSIVTGNKNYVDGVRTFQTASFVVLGEGFLGRDMGFRNTAGAIKEQAVAARVQADCAVFLNCNFEGYQDTLYAQTHRHFYRDCVISGTIDFIFGDASAVFQNCQIVLRKPLSNQKNIITANGRLDSQEKTAFVLQKCVIKGEPDLPPTTKNYLGRPWKEYSRTIIMESDFGTLIQPEGWLPWEGDFALKTLYYGEFNNVGASAKTDARVKWIGRKDIKREEARTYTVEPFLDGSWINGTGVPAHLGLYG* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2829 602 Pfam Pectinesterase 294 586 IPR000070 GO:0030599|GO:0042545
Mal4g2829 602 CDD PMEI-like_3 80 228 - -
Mal4g2829 602 Gene3D - 288 600 IPR012334 -
Mal4g2829 602 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 227 IPR006501 GO:0004857
Mal4g2829 602 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 228 IPR035513 -
Mal4g2829 602 ProSitePatterns Pectinesterase signature 2. 438 447 IPR033131 -
Mal4g2829 602 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 14 600 - -
Mal4g2829 602 Pfam Plant invertase/pectin methylesterase inhibitor 76 222 IPR006501 GO:0004857
Mal4g2829 602 SUPERFAMILY Pectin lyase-like 290 595 IPR011050 -
Mal4g2829 602 SMART PMEI_2 72 223 IPR006501 GO:0004857
Mal4g2829 602 MobiDBLite consensus disorder prediction 252 298 - -
Mal4g2829 602 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 227 IPR035513 -
Mal4g2829 602 PANTHER PECTINESTERASE 14 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2829 Mal-Chr4 81354166 81357799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2829 1 601 Carbohydrate Esterase AT2G26450 43.956 3.01e-180 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2829 - - gmx:100807628 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5062 5 124297410 124299601 Mal4g2829 4 81354166 81357799 PCT