Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2828 ATGGCTTCCTCATCTCACAAACTCTTCCTCATTCTTTTTACAATCCTCTTCTCACTCACTTTACCTCTCCAAATCAACACTTCTAAAATCACAACATTCAATCCCAACAAATTCACTTCATTAAAATCTCTATGCAAAACAACACCATACCCAAAACTTTGTTTCAACTCATTAAAACTTTCCATATCAATAAACATAAATCCAAACATTATAAACTTCCTCCTTCAATCACTTCAAGTAGCAATATCCGAAGCCACAAAACTTTCTAATCTTTTTCACGACGTTGGAATCTCGAACATCGTAGAGAAACAACGAGGATCAATTCAAGACTGCAAGGAACTTCATCAATCAACTTTATCTTCATTGAAAAGATCATTATCCGGAATCCGTTCCTCGAACAAAAGAAACATATCTGATGCTAGAATCTACCTCAGTGCAGCACTTACCAACAAAAACACATGTTTAGAAGGACTTGATTCTGCTTCTGGTAACCTTAAACAAGTTCTTGTTAATTCTGTTATTAACACTTACAAACATGTAAGTAACTCTCTTTCTATGCTCTCTAATCAAAAGGGTCACAAGAAAAAAATGGTTTCTTCAAAATGGTTATCAAAAAGCTTAGATTTCAACGAATACGATCCAAATGAATTACTTGTTGTAGCTACAGATGGAAGTGGAAACTTTAGCACTATCACTGATGCAATAAACTTTGCTCCGAATAATAGTATTGTTAGGACAGTGATTTATGTTAAAGAAGGGGTTTATGATGAAAATATTGAAATACCAAGTTATAAAACTAACATTGTGATGCTTGGTGATGGAAGTGATGCTACTGTCATCACTGGTAACAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACATTAGCTGTATCTGGTGATGGTTTTCTTGCAAGAGATATAGCATTTGAGAACAGAGCAGGACCAGAGAAGCATCAAGCAGTAGCATTAAGAGTAAACGCGGATTTAACAGCATTTTACAAATGTGCAATTTATGGTTACCAAGACACACTTTATGTTCACTCATTTAGACAATTCTATCGCGAATGCGACATTTACGGGACCATAGATTTCATATTTGGTAACGCAGCGGTAGTTTTACAAGAATGTGACATTGTATCAAGAATGCCATTACCTGGTCAATTTACTGTCATAACCGCGCAATCGCGAGATAACCCAGATGAAGACACAGGAATTTCAATCCAAAATTGTTCAATTATCGCTACGGATGAACTTTATTTTAACTCTAGTAGAGTCAAGAGTTACCTTGGAAGGCCATGGAGGGTTTTTTCTAGAACTGTTTTTATTGAATCTTATATTGATGATTTTATTGATCAAAAGGGTTGGACAAAATGGTCAAATGATCAAGGTTTGGATACTTTGTTTTATGGCGAGTATGAGAATTATGGACCTGGTTCAAAGATCGACAATCGTGTCGAATGGGATGGTTATCATTTAATGGATTATAATGATGCTTATAATTTCACTGTTTCTGAGTTTATTACTGGTGATGAATGGCTTGAATCTACTTCAGTTCCTTATGATGATGGAATTTGA 1584 0.3535 MASSSHKLFLILFTILFSLTLPLQINTSKITTFNPNKFTSLKSLCKTTPYPKLCFNSLKLSISININPNIINFLLQSLQVAISEATKLSNLFHDVGISNIVEKQRGSIQDCKELHQSTLSSLKRSLSGIRSSNKRNISDARIYLSAALTNKNTCLEGLDSASGNLKQVLVNSVINTYKHVSNSLSMLSNQKGHKKKMVSSKWLSKSLDFNEYDPNELLVVATDGSGNFSTITDAINFAPNNSIVRTVIYVKEGVYDENIEIPSYKTNIVMLGDGSDATVITGNRSVVDGWTTFRSATLAVSGDGFLARDIAFENRAGPEKHQAVALRVNADLTAFYKCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECDIVSRMPLPGQFTVITAQSRDNPDEDTGISIQNCSIIATDELYFNSSRVKSYLGRPWRVFSRTVFIESYIDDFIDQKGWTKWSNDQGLDTLFYGEYENYGPGSKIDNRVEWDGYHLMDYNDAYNFTVSEFITGDEWLESTSVPYDDGI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2828 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 188 IPR035513 -
Mal4g2828 527 ProSitePatterns Pectinesterase signature 1. 242 261 IPR018040 -
Mal4g2828 527 Pfam Plant invertase/pectin methylesterase inhibitor 41 186 IPR006501 GO:0004857
Mal4g2828 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 190 IPR035513 -
Mal4g2828 527 ProSitePatterns Pectinesterase signature 2. 361 370 IPR033131 -
Mal4g2828 527 SUPERFAMILY Pectin lyase-like 216 524 IPR011050 -
Mal4g2828 527 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 190 IPR006501 GO:0004857
Mal4g2828 527 SMART PMEI_2 36 186 IPR006501 GO:0004857
Mal4g2828 527 PANTHER PECTINESTERASE 7 526 - -
Mal4g2828 527 CDD PMEI-like_3 43 189 - -
Mal4g2828 527 Pfam Pectinesterase 218 513 IPR000070 GO:0030599|GO:0042545
Mal4g2828 527 PANTHER PECTINESTERASE 7 526 - -
Mal4g2828 527 Gene3D - 214 527 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2828 Mal-Chr4 81346048 81348579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2828 32 527 Carbohydrate Esterase AT2G26440 65.577 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2828 - - gmx:100776969 799.275