Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2826 ATGTCTCTTTCTTCAACAAAAGAGTTATTCAACCAAGCAAAATCAATACCAACTCTCATAACATGCACATTCATTTTAACATTGTTGTTATGCAGTCCATTACTGTGTGCTAGTGCTCCTACTACAACCGCAGCTGCTGGATTTGAGTTTCTTAAGGTTGCTCCATCTGAATTTGTTGGGACAGTGAAAGATGTAGTTGGCATTTTGCAAGAAGTAATGTCCATTCTTTCTGAATTTGGTGGTGATGGCTTTGGAGATTCACGTCTCTCTAATGCTGTTTCTGATTGCATTGATATGCTTGACCTTTCTTCTGATGCACTTACTTGGTCTGCCTCTGCTGCTCAGTCCCCCAAAGGTAAGCATAATAGTACTGGAAATGTGAGCTCTGATGTAAGAACATGGTTAAGTTCTGCACTTGCAAATCCAGAGACATGCATGGACGGATTTGAAGGTACTAATGGCATTGAGAGTCAATTAGTGTCTACTGGCCTAAGCCAAATGATGTCTTTGCTCTCAGAGCTTCTCACACAAGTGGACCCTAAATTAGATACCTTCACACAAAAGGAACATAAAGGTCGATTTCCTTCATGGGTTAAAAGAGATGATAGAAAGCTCTTGCAAGCAAATGGGGTAAATGTGGATGTTGTCGTTGCTACCGATGGGAGCGGTAATTTTACTAAGTTGATGGATGCGGTGCATGCTGCTCCCGATTATAGCATGAAGCGCTATGTGATTTACGTAAAAAGAGGTGTTTATATTGAAAACGTTGAAATCAAGAAGAAGAAGTGGAATCTCATGATGGTCGGAGATGGTATGAATGCCACAATTATCACTGGTAATCGGAGCTTTGTTGATGGTTGGACAACATTTAGGTCAGCTACCTTTGCTGTTAGTGGTAGAGGATTCATAGCAAGAGACATCAGTTTTCAGAACACTGCTGGTCCTGAGAAGCACCAAGCAGTGGCACTTCGATCCGATTCAGACCTCTCTGTATTCTATCGATGTGGCATTTTTGGTTACCAAGACAGCCTCTATACTCATACAATGCGCCAATTCTTCAGAGAATGCAAAATAAGTGGCACAGTAGATTTCATCTTTGGAGATGCCACAACTCTTTTTCAAAATTGTCAAATACTTGTAAAAAAAGGGTTACCAAATCAAAAGAACACTATCACAGCTCAAGGAAGAAAAGACCCTAATGAACCAACTGGTTTCTCAATCCAATTCTGCAATATTACTGCTGATTTAGACCTTCTTCATTCAGTTAATTCGACGTGGACATATCTTGGAAGACCGTGGAAGGAATATTCGAGAACGATTTTCATGCAATCTTACATAAGTGATGTGTTGAGGCCAGAAGGGTGGTTAGAGTGGAATGGAGATTTTGCATTGGATACATTGTATTATGCTGAGTACATGAATTATGGGGCTGGAGCTGGAATTAATAAACGAGTTAAATGGCCAGGGTATCACATTATGAATGATTCTAGTCAAGCTAGTAATTTCACAGTGACACAATTTATTGAGGGGAATCTATGGTTGCCAACAACTGGTGTAGCATTCACTGCTGGACTAGGAGTTTAA 1584 0.4034 MSLSSTKELFNQAKSIPTLITCTFILTLLLCSPLLCASAPTTTAAAGFEFLKVAPSEFVGTVKDVVGILQEVMSILSEFGGDGFGDSRLSNAVSDCIDMLDLSSDALTWSASAAQSPKGKHNSTGNVSSDVRTWLSSALANPETCMDGFEGTNGIESQLVSTGLSQMMSLLSELLTQVDPKLDTFTQKEHKGRFPSWVKRDDRKLLQANGVNVDVVVATDGSGNFTKLMDAVHAAPDYSMKRYVIYVKRGVYIENVEIKKKKWNLMMVGDGMNATIITGNRSFVDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAQGRKDPNEPTGFSIQFCNITADLDLLHSVNSTWTYLGRPWKEYSRTIFMQSYISDVLRPEGWLEWNGDFALDTLYYAEYMNYGAGAGINKRVKWPGYHIMNDSSQASNFTVTQFIEGNLWLPTTGVAFTAGLGV* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2826 527 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Mal4g2826 527 SUPERFAMILY Pectin lyase-like 211 524 IPR011050 -
Mal4g2826 527 CDD PMEI-like_4 51 178 - -
Mal4g2826 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 179 IPR035513 -
Mal4g2826 527 Pfam Pectinesterase 214 511 IPR000070 GO:0030599|GO:0042545
Mal4g2826 527 Gene3D - 212 527 IPR012334 -
Mal4g2826 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 161 IPR035513 -
Mal4g2826 527 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 52 525 - -
Mal4g2826 527 PANTHER PECTINESTERASE 52 525 - -
Mal4g2826 527 SMART PMEI_2 11 177 IPR006501 GO:0004857
Mal4g2826 527 Pfam Plant invertase/pectin methylesterase inhibitor 49 166 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2826 Mal-Chr4 81288761 81294021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2826 24 525 Carbohydrate Esterase AT3G43270 64.078 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2826 K01051 - gmx:100777500 810.831