Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2823 ATGTTATACTCAGCAAAAACTGATTCCTCTATTATTTTCTCTTTTAGGTCAATGCAAGCATCTGGAATGAATCCAGTGATTGCTAATACAACTCAGCTTACCATCTTCTATAATGGGAGTATTTGTATCTACGACGGAATACCTGCAGAAAAGGTGCAAGAAATAATGCTCATTGCTGCTGCTGCTGCCAAGTCTACTGAAACGAAGAAGATTGTGAAACAATCTCCCGTCCCTTCACCTGTTCCTACAAGGCCTTCTTCGCCACATGGAACTGCTGATAATATTGCTTCATCGCAGGCACCCTGCTTTCCTGCAAAGAGTAACATCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACATTCACTTCAAATGTTTCTTCAGAAGCGGCGAGACAGGTTGGGTAGTAAAGCCCCTTATCCTTCCTCACCAACAACAAAGGTGGCTGACAACATGGAGAACAACTTCGGTGCTGACAATTCGCCAGATTCGGTTTCATTGAAGGAACCAAAGGGGGGATTTCAGCCAACTATATCTGCATCTTGA 546 0.4377 MLYSAKTDSSIIFSFRSMQASGMNPVIANTTQLTIFYNGSICIYDGIPAEKVQEIMLIAAAAAKSTETKKIVKQSPVPSPVPTRPSSPHGTADNIASSQAPCFPAKSNICRLQEFPIARRHSLQMFLQKRRDRLGSKAPYPSSPTTKVADNMENNFGADNSPDSVSLKEPKGGFQPTISAS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2823 181 MobiDBLite consensus disorder prediction 132 181 - -
Mal4g2823 181 MobiDBLite consensus disorder prediction 70 98 - -
Mal4g2823 181 Pfam Jas motif 116 140 IPR018467 -
Mal4g2823 181 ProSiteProfiles Tify domain profile. 26 61 IPR010399 -
Mal4g2823 181 PANTHER DIVERGENT CCT MOTIF PROTEIN 17 159 - -
Mal4g2823 181 MobiDBLite consensus disorder prediction 139 162 - -
Mal4g2823 181 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 159 IPR040390 -
Mal4g2823 181 SMART tify_2 26 61 IPR010399 -
Mal4g2823 181 Pfam tify domain 29 60 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2823 Mal-Chr4 81137348 81138232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2823 32 143 Tify Gene Family AT5G20900 53.509 3.34e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal4g2823 tify 4.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2823 K13464 - gmx:100306045 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5048 5 124142629 124144959 Mal4g2823 4 81137348 81138232 PCT