Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2811 ATGGAAGAAAAAGCTTCAACAATGAAATTGTTAGAAGTTGATGAAAGGCCACCATACGATGATAACAATAAAGATTCACAAAACAAGACCGATATTGAACCCTCATCCTTTCATATGAATACTCCAGGATCTACTCTTTTATTAAGTTTGAGCCTTAATAACACAACACAACTTCCCCATCAAATTCAAGGAAATCCACAAATCCAAATTGGCAATATACGAGTGAAGCTTGAGGAAGCAAAGAAGGAGAATGAAAATTTAAAAGGTATGCTAAATCTGGTCAACGATCGATGCAATGTTCTTCAGAATCGTTTACTTTTGGCTATGCATATGAATCAATCACCTTCATCACCTCAAAATATTCACAACTTGCTGAAGGGAAATAGACAAGATGCGGAGAAACCAGTGTTACCTACTAGGCAATTCTTGGATGAGCCTTCAGCTTCAGATTGTAGCAAAAATAATGGATTTGCCTTAGCGGAAAACAATGAAAACAACATGGGAAGAAATTTTGCATGTGAGCACATTAATGAAGGTGAAATAAATAGCAAAATAGAGGAGCAATCATCTGAGGTTGGCTGCAGGAGAGCTAGAGTGTCCATCAGGGCACGATCAGATTTTGCTTTCATGGTTGATGGGTGTCAATGGAGAAAATATGGGCAAAAGACAGCCAAGGGTAACCCATGTCCACGAGCCTACTATCGTTGCAGTATGGGGACTTCATGCCCAGTTCGTAAGCAGGTGCAAAGATGTTTTAAAGATGAGAGTGTGTTCATCACAACCTATGAAGGGAGCCACAATCATCAACTTCCACCAGCAGCAACACCAATAGCAAACTTAACATCATCAGCACTCAACACATTCCTTTCTACCTCAACATCAAATTTACAACAATATGGCAACAATCTAACAAACACATTCCTCTTCTCTTCACCATTATCTCCACCAAACTCAAATGCTATAGCTACTTTCTCTCCATCTCCAACATGTCCTACAGTTACACTTGATTTTACACTCCCTCCAAGTAACTACTTGCAATTCAAAAACCACAAACAATCATCATTGTTCCCTTTTCCATTTCAGGGTTACTCCCCTCAATCATTTGAGGTATTCCCAAATATGATAAACAATGAGAGAAAACTTGCTTTGGTTGATGTTGTGAGTGAAGCTCTAGAAAAAGATCCTTCTCTCAAGGAAGCATTATTTTCTGCCATGTCCTCATTCACAAATGGAGATGCTTTAAATATTAATAACCAAAGCCAATTACCTAGTAAGAGTAGCGGTTAA 1287 0.3854 MEEKASTMKLLEVDERPPYDDNNKDSQNKTDIEPSSFHMNTPGSTLLLSLSLNNTTQLPHQIQGNPQIQIGNIRVKLEEAKKENENLKGMLNLVNDRCNVLQNRLLLAMHMNQSPSSPQNIHNLLKGNRQDAEKPVLPTRQFLDEPSASDCSKNNGFALAENNENNMGRNFACEHINEGEINSKIEEQSSEVGCRRARVSIRARSDFAFMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGTSCPVRKQVQRCFKDESVFITTYEGSHNHQLPPAATPIANLTSSALNTFLSTSTSNLQQYGNNLTNTFLFSSPLSPPNSNAIATFSPSPTCPTVTLDFTLPPSNYLQFKNHKQSSLFPFPFQGYSPQSFEVFPNMINNERKLALVDVVSEALEKDPSLKEALFSAMSSFTNGDALNINNQSQLPSKSSG* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2811 428 MobiDBLite consensus disorder prediction 1 40 - -
Mal4g2811 428 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 424 IPR044810 GO:0003700
Mal4g2811 428 SUPERFAMILY WRKY DNA-binding domain 204 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g2811 428 Pfam WRKY DNA -binding domain 212 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g2811 428 Gene3D WRKY domain 195 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g2811 428 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g2811 428 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g2811 428 MobiDBLite consensus disorder prediction 1 28 - -
Mal4g2811 428 Coils Coil 70 104 - -
Mal4g2811 428 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 14 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2811 Mal-Chr4 80706204 80709817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2811 71 338 WRKY Transcription Factor Family AT4G04450 38.141 1.18e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal4g2811 WRKY 1.1e-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2811 4 80706204 80709817 Mal5g5030 5 123892706 123894872 PCT