Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2808 ATGGTGATAATAAACCAAGCAAGGAGGATTGAAGGGAAAATTATGCGCTTGGGGAAATACGAATTGGGGAAAACACTTGGTGAAGGAAATTTTGGAAAAGTGAAATTGGCTAGAGACACTGATTCTGGACAATTCTTTGCTGTGAAGATTCTTCAAAAGAATAAGATTGTTGATCTCAATAACACTGATCAGATAAAGAGGGAGATATCAACGTTGAAGCTTCTGAAACACCCTAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTTCATCCAAAGGTAAACTTACAGAAGCTCATGGTAGAAAGATGTTCCAACAATTGATTGATGGTGTGAGCTACTGCCACAACAAAGGTGTCTTCCACAGGGATCTTAAGTTAGAGAATGTACTTGTGGATGCCAAAGGGAGCATAAGGATAACTGATTTTAACCTCAGTGCTTTGCCTCAACATTGTAGGGCAGATGGGTTGCTGCATACAACCTGTGGAAGTCCAAATTATGTTGCTCCCGAGATTCTTGCCAACAGAGGCTATGATGGCGCGAAATCGGATATTTGGTCATGTGGTGTTATCTTATATGTAATTCTAACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTATCAAAAGATTTTCAAAGGAGATGTTCAGATACCAAGATGGCTATCACCTGGTGCTCAAAATATTATACAGAGAATTCTTGATCCCAATCCTAAAACCCGAATAACGATGGATATGATCAAAGAAGATGAATGGTTTAAGGAGGGTTATAATCCTGCAAATCTAGACGATGAGGAAGAGGATGTATACATTGACGATGAAGCCTTTTCCATCCAAGAAGTGTCCCTTGAAGCAGACCAGGGTAGTCCAAAATTACCAACGCTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGTTTGGACCTCTCTGGATTTTTTGAGCAAGAGGATGTCTCGGAGAGGAAGATAAGATTTACATCAAACTATTCACCAAAAGATTTGACGGAGAAGATTGAGGACATTGTAATAGAAATGGGATTTAGAGTTCAGAAGAAAAATGGAAAACTCAAAGTTATACAAGAGAATAAAGCTCATAAAAGTCTAGGAAGCCTCTCAGTGGCAGCAGAGGTTTTAGAGATAGGTCCATCTTTGTATGTAGTAGAACTAAGGAAGTCTTATGGAGATGCTACTGTATATAGACAATTATGCAAAAGGTTATCAAATGACTTGGGTATAGCCGATGCGGCACAGCTAGTGAGCTCAGAAATGATAATCATATGA 1350 0.3867 MVIINQARRIEGKIMRLGKYELGKTLGEGNFGKVKLARDTDSGQFFAVKILQKNKIVDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGSIRITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIQRILDPNPKTRITMDMIKEDEWFKEGYNPANLDDEEEDVYIDDEAFSIQEVSLEADQGSPKLPTLINAFQLIGMSSCLDLSGFFEQEDVSERKIRFTSNYSPKDLTEKIEDIVIEMGFRVQKKNGKLKVIQENKAHKSLGSLSVAAEVLEIGPSLYVVELRKSYGDATVYRQLCKRLSNDLGIADAAQLVSSEMIII* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2808 449 Pfam NAF domain 315 374 IPR004041 GO:0007165
Mal4g2808 449 Gene3D Transferase(Phosphotransferase) domain 1 13 319 - -
Mal4g2808 449 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Mal4g2808 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mal4g2808 449 Gene3D Kinase associated domain 1, KA1 320 436 - -
Mal4g2808 449 PANTHER - 12 440 - -
Mal4g2808 449 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2808 449 SUPERFAMILY Protein kinase-like (PK-like) 17 303 IPR011009 -
Mal4g2808 449 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2808 449 PANTHER CBL-INTERACTING PROTEIN KINASE 21 12 440 - -
Mal4g2808 449 CDD CIPK_C 319 430 - -
Mal4g2808 449 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Mal4g2808 449 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2808 Mal-Chr4 80421670 80428707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2808 83 440 CBL-interacting serine-threonine protein kinases AT3G17510 72.702 1.78e-178 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal4g2808 Pkinase 3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2808 K07198 - gmx:100815660 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5011 5 123648283 123653572 Mal4g2808 4 80421670 80428707 PCT