Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2794 ATGGATGCTGATTTTGAGGGAAAAAATCAGCATTTTTATGGACCAGTAGTGCCAGAAATGAAAGGTGTTGTTGGAAGGGGGAGTAAGGATTGGGATTTGAATGATTGGAGATGGGATGGTGATCTTTTTACTGCTAAGCAATTGAATTCAGTGCCAACCGATTGTCGGAATCGACAACTTTTCCCGGTTGATCCCGAAATACCTGAAAATGTTGATGGTTCGAATAATTTTGTTTCTGGTGAAGGAAGTAGAGAGTTGGAGAAGAGGAGGAGGGGTTTTGGTGGTGAAGGGTTGGAGATGAATGATGATTTTGGTTCTCTTAATTTGAATCTTGGGGGTCAAGTTTACCCTATAATGGAAGGGGAGGAGAAAAGTGGTAAAAAGACGAAGATTGCGCCTGTGACTACTTCGAATCGTGCTGTTTGTCAGGTGGAGGATTGTAGGGCGGATCTTAGTAGCGCGAAGGACTATCATCGTCGACACAAAGTTTGTGATGTGCATTCTAAGGCTAGCAAGGCACTTGTTGGAAATGTTATGCAGCGTTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTAGGCGTCTTGCAGGCCACAATAAGAGGAGGAGGAAGACACATCCTGATGCTTCTGTAGTTAATGGAGGCTCTTCGAATGAAGAAAGGGGAAGTAGCCATCTCTTGATGAGTTTACTAAGGATACTGTCCAATATGCATTCAAACGGCTCAGATCATACGAGAAACTTGGATGGTCTCTCTCGTCTGATTGGGAACCTGACAAGTTTAGCTGGTACATTGAACGGAAGAAATATAGCTTCCTTGTTGGAAGGACCTCAAGATTTAGTAAAACCCGGGACATCTGGAGCTGCACAGAATGTTCCAAACTCAAATGGTGCTGAACCATCAAGACCATTTAATTCTTCTATTGAAATGAGTTACGGTCCGATCTGTCAGGACCCTCCAGAGTCTAGGTTACAGTGCGCGGCAGTTCCTGCCAATCATTTGACACAAAAATGCATACCTTCAAGCAGTGTTGGAGTAGGATGTTTAAAACCTCCTCTGGTACCACAGTCCTCAAATGTAGTTCCTTCAATGGGTAGCCTTCCACCTCGTCCAGTTGCCGCAGATACTACAGTTGGAAGAAACGGGTTATGTAATATTGACCTAAATAATGTATATGATGACGGGCAGGATTATGTTGAGAACCCCGAGAATTCTCATCCACCTTTGGCCTTAGGGGTCGAATCTCGTGATCATCTTCCATTGGTACAATGTGATTCTCTCAAGTCAAGTCCACCACAGACGAGTAGAAACTCAGATTCGACCTCTACTCAATCACCATCTAGTTCTAGCGGAGAAGGCCAGAGTCGAACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCTAATGATATCCCGCTTGTTCTTCGATCACAGGTCCTTAGCTGGTTATCCAACAGTCCCACCGAGATAGAGAGCTATATAAGACCAGGCTGTATTATTTTAACTATCTGTCTCCGCCTTGAAAATTCTGCATGGGATGAGCTATGCTATAATCTGGGGCCCAGCTTGAGAAAGCTTCTTGCTGCATCAAATGATTCTCTTTGGAGAACCGGATGGATATATACCAGAGTGCAGCACTCTGTAGCTATTTTTTATAATGGTCAGGTGCTCATAGATGTACCATTGCGTCTTGGAAGCCCACAAAATTGTCAGATTTTGTGCGTTAAACCCCTTGCTGTCTCTGCAAATGCAGACGTAAAATTTACTGTGAAAGGGTTAAACCTTTTCCTGTCTAGTGCAAGGTTGCTCTGTGCACTTGAAGGGAAGTACCTGGTAGAGGATGTGTGTTATGATTTGATTGATGGGGCTGATGCAGCCATTGGACATCATGAGCTTCAGAATCTCAGCTTCTCTTGTCATATACCAAATATGACTGGAAGAGGGTTTATTGAGGTTGAAGATAATAGTCTCAGCAGCTGTTCCTTTCCATTCATAGTTGCAGAACAAGAAATTTGTTCTGAGATATGTAAGCTGGAAACTGTCATTGAGGCGGCAGAGACAGCTGATGACGTCCAGATCAAAGCCAAATTAATGGAAGAAAAGACTCGAGCAATGAATTTCGTACAAGAAATGGGTTGGCTCCTTCATAGAATTCGTATGAAACTCCGGCTAGGGCCAATGGCACCTGTTCAAGATCGTTTCCATTTTAATCGATATACATGGCTAGTCGGCTTCTCTATGGACCATGATTGGTGCGCTGTGATGAAAAAACTCTTGGACATTATCTTTGAAGGTGAAGTTGATACTGGAGAACATACCTCTGCCGAGCTTGCGTTGTTAAACATGGGTCTTCTACACAAAGCTGTGAAGAGAAATTGCAGGCCTATGGTGGAGCTACTGTTAAACTTTGTGCCGGTTAAAATTCTAGATGGTGGAGATAGTAAAGAGATGCTAGTCAACAAGTTGCCCGACAGATTCTTGTTTAGACCTGATACCGTTGGGCCTGCTGGGCTGACTCCTGTTCATGTTGCAGCAAGTATGAATGGCTATGAGAATGTATTGGATGCGTTAACCGATGATCCGGGAATGGTGGGAATTGAGGTATGGAAAAGTGCCAAGGACAATACAGGTTTAACACCTAATGACTATGCATCCCTTAAGGGCCACTACTCTTACATTCAACTTGTGCAGAGGAAAACAATCAAGAGCAGCCAAAGTCAACATGTGCTTGATATCCCAGGCACTCTTGTAGATGGAAACACGAAAAAGCAATCAGATGGGCATAAGTCATCAAAAGTTTCGAGTTTGCATACCGAGAAGATTGCCACTACTGCAATGCCAAATCATTGTGGGCTCTGCCAGCAGAAGCTGGCATACGTCGGCGTCGGCGGCATGAGGAGGGCACTTGTTTATAGGCCGGCGATGCTGTCAATGGTTGCCATTGCAGCTGTATGTGTCTGCGTGGCTTTGCTCTTCAAAAGTTCACCAAGAGTTTACTATGTATTCCAGCCTTTCAGTTGGGAATCATTGGATTATGGTTCAATCTAA 3084 0.439 MDADFEGKNQHFYGPVVPEMKGVVGRGSKDWDLNDWRWDGDLFTAKQLNSVPTDCRNRQLFPVDPEIPENVDGSNNFVSGEGSRELEKRRRGFGGEGLEMNDDFGSLNLNLGGQVYPIMEGEEKSGKKTKIAPVTTSNRAVCQVEDCRADLSSAKDYHRRHKVCDVHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDASVVNGGSSNEERGSSHLLMSLLRILSNMHSNGSDHTRNLDGLSRLIGNLTSLAGTLNGRNIASLLEGPQDLVKPGTSGAAQNVPNSNGAEPSRPFNSSIEMSYGPICQDPPESRLQCAAVPANHLTQKCIPSSSVGVGCLKPPLVPQSSNVVPSMGSLPPRPVAADTTVGRNGLCNIDLNNVYDDGQDYVENPENSHPPLALGVESRDHLPLVQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEGQSRTDRIVFKLFGKDPNDIPLVLRSQVLSWLSNSPTEIESYIRPGCIILTICLRLENSAWDELCYNLGPSLRKLLAASNDSLWRTGWIYTRVQHSVAIFYNGQVLIDVPLRLGSPQNCQILCVKPLAVSANADVKFTVKGLNLFLSSARLLCALEGKYLVEDVCYDLIDGADAAIGHHELQNLSFSCHIPNMTGRGFIEVEDNSLSSCSFPFIVAEQEICSEICKLETVIEAAETADDVQIKAKLMEEKTRAMNFVQEMGWLLHRIRMKLRLGPMAPVQDRFHFNRYTWLVGFSMDHDWCAVMKKLLDIIFEGEVDTGEHTSAELALLNMGLLHKAVKRNCRPMVELLLNFVPVKILDGGDSKEMLVNKLPDRFLFRPDTVGPAGLTPVHVAASMNGYENVLDALTDDPGMVGIEVWKSAKDNTGLTPNDYASLKGHYSYIQLVQRKTIKSSQSQHVLDIPGTLVDGNTKKQSDGHKSSKVSSLHTEKIATTAMPNHCGLCQQKLAYVGVGGMRRALVYRPAMLSMVAIAAVCVCVALLFKSSPRVYYVFQPFSWESLDYGSI* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2794 1027 Gene3D - 778 924 IPR036770 -
Mal4g2794 1027 Gene3D - 133 203 IPR036893 GO:0003677|GO:0005634
Mal4g2794 1027 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 18 1026 - -
Mal4g2794 1027 MobiDBLite consensus disorder prediction 437 466 - -
Mal4g2794 1027 Pfam SBP domain 142 215 IPR004333 GO:0003677
Mal4g2794 1027 MobiDBLite consensus disorder prediction 64 86 - -
Mal4g2794 1027 SUPERFAMILY SBT domain 140 220 IPR036893 GO:0003677|GO:0005634
Mal4g2794 1027 MobiDBLite consensus disorder prediction 435 466 - -
Mal4g2794 1027 SUPERFAMILY Ankyrin repeat 793 907 IPR036770 -
Mal4g2794 1027 MobiDBLite consensus disorder prediction 206 233 - -
Mal4g2794 1027 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 18 1026 IPR044817 GO:0003677
Mal4g2794 1027 ProSiteProfiles Zinc finger SBP-type profile. 139 216 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2794 Mal-Chr4 79741172 79751048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2794 22 1026 SBP-box Gene Family AT3G60030 45.472 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal4g2794 SBP 9.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2794 - - gmx:100792774 1561.58