Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2768 ATGAAACAAATGGAATTGGATGCAAATTCTGATGCCAAAGAGGATAGTCCTCTTCGGCACAAACCTAAAAAAGACAACACACTTGAGTCTCCTGAAAGTCTGAGAAGTAAAAAGATATCAGCTAGATGGGATCCAGCTGAAGCATGCCGGCCTATAATTGATGAAGCGCCTGTGTTTCATCCGACTATTGAAGAGTTTGAAGATACACTGAGTTACATAGCGAAGATACGTCCCCTAGCTGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGTTGGGTTCCACCTTGCCTTCTCAAGGAGAAAGATATATGGGAAAATGCTGAGTTTTCCACCCGTATTCAGCAAATTGATTTACTTCAAAATAGAGAACCTATGAAGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAGGAACTCCAAATCAGGAACATGTAGGAGAGATTCCAAATCAGCTTCTGAAGCTAATAATCCTTCCGAAGCTGACGAGAAATACGGATTTCAAGCAGGGTCCGACTTCACGTTTAAAGACTTTCAGCAATATGCTAGTTACTTTAAGGAATGCTACTTTGGGTTGAAAGATGCAAATGAAGATGGAAAAGTCAGCGATAGTAACCACCAAAACCGAAAGGAGCCCTCCGAGGAGGAAATTGAAGGTGAATACTGGCGGATAGTTGAGAACCCAACGGATGAAGTTGAGGTGTACTATGGAGCGGACTTGGAAACTGGAGTATTTGGAAGTGGTTTTCCTAAGGCATCGTCGGTAACTAAGGGTCATCCGGATCAGTATGCACTTTCTGGTTGGAATCTAAATAACTTCCCGCGGCTACCAGGTTCTGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTACTAGTTCCATGGCTGTATGTTGGCATGTGCTTTTCATCCTTTTGTTGGCATGTTGAGGATCATCACCTCTATTCACTTAATTATCTTCACTTTGGTGACCCAAAGATATGGTATGGAGTACCTGGTAGCTATGCTTCTGCTTTAGAAGATGCAATGAAGAAGCACTTGCCTGATTTGTTTGAGGAAGTACCAAATCTACTCAATGATCTGGTTACTCAGTTATCTCCATCAATTCTTAAAGAGGAGGGAGTGCCTGTATATCGCACTGTTCAGCACTCTGGGGAATTTGTCATTACTTTTCCGAGGGGGTACCACTCTGGGTTCAATTGTGGGTTCAACTGTGCAGAAGCAGTGAATGTAGCTCCTGTCGATTGGTTAACGCATGGCCTAAATGCTGTTGAGCTTTACAGTGTACAACGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCATCGCTGGAAGCTATACGAGCCCTTGCAGAGTTAGCTCTTCATGGAAAGGAAAGTTCAAAAAATTTGAAATGGAGAAGCTACTGTGGGAAAGATGGAGTTCTTACTAAGGCATTTAAGGCAAGGATAAAGATGGAAGAAGAGAGGCTAGACTGTCTTCCAACTCATTTTAAGTTGCTGAAGATGGGCAACGACTTTGACTTGCATACGGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGTACTTATCTGCTGTAGGTTGTGAGTGCTCTCCTGATAAATATTCTTGTCTTAAGCATGCTAGTTCATTCTGCTCATGCGAAATGGACAAAAGATTTGTTCTGCTTCGATATAATATGAATGAGCTAAACAAATTGCTTGAAGCACTAGAAGGAGATTCACTAGCACTTGAGTTATGGGAAAATAAAAACTTCGGAATGGTTTCTTCCGAGGCCAATGAGGCTTCAAATTTAAACGCAGCTTGTAGTCCGTCTAGTCATGTTACTTCAGAGGTAATGCAGTCTGAATCTCAGCTTGTAACTTTTAGTGCACCAAATGGAAGTATAGATAGTGATCATGACAATAAGATAGTCATATCCGATAACCATCATAACAAGGGTGATTCAGTAGAGGGAAAAGTAAGCTTTTCAGAGACCAAAAAGGAACAAGACAACATGGAACTCATTGGTGTGGGTGATTTATCACACTCATTTTCTGTTGTGAAGACAGAAGTTTCATCATGCTCAAAGGATGTTCACAATTCTTGTACGTCTGACGGTGGAAAATATGAGGTGGATCTGAATATGGATTCAGATTCAAGAAAGAAACCCAGAATTCTATTTTTAAAAGAAGTCATAGACACCACGAATGCGAGTATACAGGAAAGCTGCCTAATGCGAATTTTTGGTACTTCTGTCAAGCCTATAGGTTTGGGATCTGTTGTTCATGGAAAGCTATGGTGCAGTAAGCATGCAATATATCCAAAAGGATTCAAGAGTCGAGTTAATTTCTTTAGTATCCTCAATCCAACAAGAATCTGTAGCTATGTATCTGAAGTAATTGATGGTGGACTTCTAGGACCTCTTTTCAAGGTTACAATGGAAGAATGTCCAAGTGAGGCTTTTACGGAAACCTCAGCTGATAAGTGTTGGGAATCAGTTCTTAAGAGATTACATGACAAAATCACGGAGCGAAGGAGTCTAGGTGAACTTGAACTTCCTTCCTTAGAGCTCCTGAAAAGCATTAACGGTTTAAGAATGTTTGGCTTCCATTTACCGTCCATTGTTCAGGCCATCGAAGCTCAAGATCCCAGTCATCAGTGTGCAGAGTATTGGAATCACAAAGGTTTTTTCCCTACATCTCCAGAAAGTGTCATCGATAACTGTAAAGTCCTATGTTGTTCAAGTAGCGCTACGGATAATGTCAATCCCAAAGTTTTTGGTATCAATTTGATTGATCAGGCAAAAGACAACATAGGAGGAAGTTTTTATTCTCTTGAAGAGATGAAATCGATACTACAAAAAGCAAGTCCCGATGAGCTAAGCTCATTGCGCAAGTTACTCGGCTCCGACACACAGTGCTCTGAGTGGAGAATGGCATTGACATCACTGATGGATGAGATTCAGAAAGCTTTGTAG 2976 0.411 MKQMELDANSDAKEDSPLRHKPKKDNTLESPESLRSKKISARWDPAEACRPIIDEAPVFHPTIEEFEDTLSYIAKIRPLAEPYGICRIVPPACWVPPCLLKEKDIWENAEFSTRIQQIDLLQNREPMKKKSRGRKRKRRRNSKSGTCRRDSKSASEANNPSEADEKYGFQAGSDFTFKDFQQYASYFKECYFGLKDANEDGKVSDSNHQNRKEPSEEEIEGEYWRIVENPTDEVEVYYGADLETGVFGSGFPKASSVTKGHPDQYALSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDPKIWYGVPGSYASALEDAMKKHLPDLFEEVPNLLNDLVTQLSPSILKEEGVPVYRTVQHSGEFVITFPRGYHSGFNCGFNCAEAVNVAPVDWLTHGLNAVELYSVQRRKTSLSHDKLLFGSSLEAIRALAELALHGKESSKNLKWRSYCGKDGVLTKAFKARIKMEEERLDCLPTHFKLLKMGNDFDLHTERECFSCFYDLYLSAVGCECSPDKYSCLKHASSFCSCEMDKRFVLLRYNMNELNKLLEALEGDSLALELWENKNFGMVSSEANEASNLNAACSPSSHVTSEVMQSESQLVTFSAPNGSIDSDHDNKIVISDNHHNKGDSVEGKVSFSETKKEQDNMELIGVGDLSHSFSVVKTEVSSCSKDVHNSCTSDGGKYEVDLNMDSDSRKKPRILFLKEVIDTTNASIQESCLMRIFGTSVKPIGLGSVVHGKLWCSKHAIYPKGFKSRVNFFSILNPTRICSYVSEVIDGGLLGPLFKVTMEECPSEAFTETSADKCWESVLKRLHDKITERRSLGELELPSLELLKSINGLRMFGFHLPSIVQAIEAQDPSHQCAEYWNHKGFFPTSPESVIDNCKVLCCSSSATDNVNPKVFGINLIDQAKDNIGGSFYSLEEMKSILQKASPDELSSLRKLLGSDTQCSEWRMALTSLMDEIQKAL* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2768 991 MobiDBLite consensus disorder prediction 1 40 - -
Mal4g2768 991 ProSiteProfiles JmjC domain profile. 264 430 IPR003347 -
Mal4g2768 991 ProSiteProfiles FYR domain FYRN motif profile. 744 802 IPR003888 GO:0005634
Mal4g2768 991 Pfam F/Y rich C-terminus 806 892 IPR003889 GO:0005634
Mal4g2768 991 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Mal4g2768 991 SMART fyrc_3 808 903 IPR003889 GO:0005634
Mal4g2768 991 Gene3D - 749 888 - -
Mal4g2768 991 PANTHER LYSINE-SPECIFIC DEMETHYLASE 645 990 - -
Mal4g2768 991 SMART fyrn_3 758 802 IPR003888 GO:0005634
Mal4g2768 991 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 601 - -
Mal4g2768 991 MobiDBLite consensus disorder prediction 121 165 - -
Mal4g2768 991 SMART cupin_9 264 430 IPR003347 -
Mal4g2768 991 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 645 990 - -
Mal4g2768 991 Pfam jmjN domain 57 90 IPR003349 -
Mal4g2768 991 MobiDBLite consensus disorder prediction 128 145 - -
Mal4g2768 991 Pfam JmjC domain, hydroxylase 297 413 IPR003347 -
Mal4g2768 991 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Mal4g2768 991 SMART JmjN_1 55 96 IPR003349 -
Mal4g2768 991 SUPERFAMILY Clavaminate synthase-like 236 445 - -
Mal4g2768 991 Gene3D Cupin 41 414 - -
Mal4g2768 991 ProSiteProfiles FYR domain FYRC motif profile. 804 894 IPR003889 GO:0005634
Mal4g2768 991 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 601 - -
Mal4g2768 991 MobiDBLite consensus disorder prediction 200 221 - -
Mal4g2768 991 Pfam F/Y-rich N-terminus 757 799 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2768 Mal-Chr4 78404579 78411372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2768 64 988 JUMONJI Transcription Factor Family AT4G20400 48.514 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal4g2768 JmjC 6e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2768 - - gmx:100801775 1437.17