LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal4g2745	ATGATTGATTGGGTGGCGAAGCAAGCCCGAATTGCGGGGTTTACTATTGTGACCGGGCGGTCAAACTATAAAATAGCAAAACCATATGTGGAAATTGGTTGTTCAAGGGGCGGATCATATGACAAAAGAAGTCAAAGTAGTGGGAAGAAATTGAAGCGTGAGGGGACCGGTTCAAGAAAATGTAATTGTCCGTTTCGGATAAGAGGTTATGTGTGGTTGCCCGCCAACAATTGGTATATTATCATCACAAATGGACTCCACAACCACAAGATGGAGCCTAAGTTAGAAGGGCACCTAAATGTCAGTAGATTGAAGGGGAGTACAAAGGGCATTGTTGCGGATTTGTCGAAGAGTTTGGTGGCACCGAAAAATATATTGAGTCACTTGAAAGACAAAATTGAAGATAATGACACAACCATCAAACAAGTTTACAATTGCCGGCAAAGGTTAAAAGCAAGTGCAAGAGGTGATAAGATGGAGTTGCAACATTTGATAGCAAAATTGGAGGAGCATCATTATGTTCACTTTAGTAGAACAAAGGATGAGACAAGTACTCTCCAAGATATTTTCTTTACTCATCCGAAATCTATCAAGTTGCTCAACACTTTTCCGTTGGTTTTGGTGATGGATTCCACTTACAAAACCAACATGTATAAGATGCTTTTGTTTGAGATTGTTGGGACCACCTCAACCGAGATGACATACTCCGTTGGTTTTGCATTTGTAGCCAACGAAAAAGAGGATAATTTCACTTGGGTCCTACAAATGGTGCGTGGTCTACTCTTATCGAAAGCCAATGTACCTAAAGTCATCTCCATCGATAGATGCATGGCTTTGATGAATGAGGTAGCCACCGTTTTTCCGAAATCTAAAGCATTACTTTGTTACTATCACATTTCATAA	903	0.4042	MIDWVAKQARIAGFTIVTGRSNYKIAKPYVEIGCSRGGSYDKRSQSSGKKLKREGTGSRKCNCPFRIRGYVWLPANNWYIIITNGLHNHKMEPKLEGHLNVSRLKGSTKGIVADLSKSLVAPKNILSHLKDKIEDNDTTIKQVYNCRQRLKASARGDKMELQHLIAKLEEHHYVHFSRTKDETSTLQDIFFTHPKSIKLLNTFPLVLVMDSTYKTNMYKMLLFEIVGTTSTEMTYSVGFAFVANEKEDNFTWVLQMVRGLLLSKANVPKVISIDRCMALMNEVATVFPKSKALLCYYHIS*	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal4g2745	300	Pfam	Transcription factor AFT	42	91	IPR014842	GO:0000981\|GO:0036086
	Mal4g2745	300	MobiDBLite	consensus disorder prediction	43	58	-	-
	Mal4g2745	300	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1	41	300	-	-
	Mal4g2745	300	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	41	300	IPR031052	GO:0006355
	Mal4g2745	300	Coils	Coil	151	171	-	-
	Mal4g2745	300	Pfam	MULE transposase domain	206	299	IPR018289	-
	Mal4g2745	300	MobiDBLite	consensus disorder prediction	38	58	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal4g2745	Mal-Chr4	77785199	77786101	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Mal4g2745		MULE	1.1e-23	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal4g2745	-		-	vun:114181823	271.552