Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2743 ATGCTTACATGCATAGCACGTCCAAAGAAACTCGAAGAAGATTCAGATTCAAACAACAATGCAAAGAGCGTAAAATCGCTAACATGTCAGATAAAAGACATGGCGTTAAAAGCTTCTGGTGTATACAAAAACTGTAATCCATGTACTCCCGCGACTGGACTCCGAAACAGTGGCTCCGAGTCAGAAGTATCTGATTCGGAGAAGTTTCGGAGGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGTTGAAAGGGATATCAAGTGGAGAGGGAACACCGAGTTCTTCGTCTTCGTTTGGTGGAGGAAGTGGGAGGAGAGTGGTGGTGCTGGAGGAGGAGGAAGGGAAGGAGTGGGTGGCACAGGTGGAGCCTGGTGTTTTGATTACTTTTGTGTCTCTTCCAAGAGGTGGGAATGATCTCAAGCGGATACGATTCAGTCGCGATATATTCAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGATAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCCTTCCCGCTTCCAACTCCCGCAAGATCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGCAGACAGCCCAGTGACACCTCCATTGACCAAGGAACAACTATCGCGCAATTTATACCGACCAACAGGAATGGGAATGGGATACTCATCCTCGGATTCCTTTGATCAACACTCAATGCAGTCCAAACATTATCAGTATGACTTAAGTGGTATGAACTCAACTCCAAAGGTTTCAACCATTAGTGCTACTAAGACAGATATATCATCAGTGGCTGCTTCGATAAGAAGTAGCTCTTCTAGAGAAGCTGATCGCTCTGGTGATTTATCGATGAGCAATGCTAGTGATCCGGATAGTGAGTGGGTCGAGGAAGATGAACCTGGTGTTTACATTACCATTAGGTCTATGCCAGGTGGCAAAAGGGAGATCAGAAGAGTCAGGTTCAGTCGTGAAAAATTTGGGGAGATGCATGCGAGACTATGGTGGGAAGAGAATCGCGCCAGAGTACATGAACAATACTTGTGA 1056 0.4612 MLTCIARPKKLEEDSDSNNNAKSVKSLTCQIKDMALKASGVYKNCNPCTPATGLRNSGSESEVSDSEKFRRTRTWGKEMEARLKGISSGEGTPSSSSSFGGGSGRRVVVLEEEEGKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPARSEDESSKRESIADSPVTPPLTKEQLSRNLYRPTGMGMGYSSSDSFDQHSMQSKHYQYDLSGMNSTPKVSTISATKTDISSVAASIRSSSSREADRSGDLSMSNASDPDSEWVEEDEPGVYITIRSMPGGKREIRRVRFSREKFGEMHARLWWEENRARVHEQYL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2743 351 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 351 - -
Mal4g2743 351 MobiDBLite consensus disorder prediction 51 71 - -
Mal4g2743 351 MobiDBLite consensus disorder prediction 267 294 - -
Mal4g2743 351 MobiDBLite consensus disorder prediction 83 104 - -
Mal4g2743 351 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 351 IPR044532 -
Mal4g2743 351 Pfam Transcription factor regulating root and shoot growth via Pin3 116 170 IPR013591 -
Mal4g2743 351 Pfam Transcription factor regulating root and shoot growth via Pin3 296 350 IPR013591 -
Mal4g2743 351 MobiDBLite consensus disorder prediction 88 102 - -
Mal4g2743 351 MobiDBLite consensus disorder prediction 1 24 - -
Mal4g2743 351 ProSiteProfiles BRX domain profile. 116 171 IPR013591 -
Mal4g2743 351 MobiDBLite consensus disorder prediction 267 300 - -
Mal4g2743 351 MobiDBLite consensus disorder prediction 181 220 - -
Mal4g2743 351 ProSiteProfiles BRX domain profile. 296 351 IPR013591 -
Mal4g2743 351 Pfam Transcription factor BRX N-terminal domain 13 48 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2743 Mal-Chr4 77607637 77614443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2743 1 351 Major Intrinsic Protein MIP AT1G31880 42.257 2.47e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2743 - - gmx:100794109 487.648