Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2739 ATGGTTGATGTTCTAAGCCCTTTCACAATCCCATCTCCTCCTCCACCATCTTCTTTATCAAACAAAAACAATAGCATACCCATGTTATACTATGGTCTAGTAGTGATGGGAATTGCAGCCATATTCCTAGCAATTTATAACATCATCATTATCAAACGTTGCAATAGGAGCCACAATCAAGCACAACCCACAAGGCCAAATCTTATGGTTGTAGAAGGATTTGAAAGAAGTAGCAATAGGAGCTTTGAAAACCAACAAAGGAACTTGCTTTCAAGCTTCAAGTACAAGAAGGAAGTTGTAGCAAAAGAAGAAGAGCAAAAGGGCTATGATTATGAATGTGCTGTTTGCTTATCGGTTTATGAAGAAGGTGAAGATGTTAGGAAGCTACCAAAGTGTAAACATTGTTTTCATGCACTTTGTATAGATATGTGGCTTTATTCTCACTTCGATTGCCCAATTTGTAGAGCACCCGTTGGTCCTTTTTGTCATAATTTTCAAGAAGAGAATTCTCGTGATGTGTTGATTGAATCTGGTGGCAGCTTCTCTGTTTGA 552 0.3822 MVDVLSPFTIPSPPPPSSLSNKNNSIPMLYYGLVVMGIAAIFLAIYNIIIIKRCNRSHNQAQPTRPNLMVVEGFERSSNRSFENQQRNLLSSFKYKKEVVAKEEEQKGYDYECAVCLSVYEEGEDVRKLPKCKHCFHALCIDMWLYSHFDCPICRAPVGPFCHNFQEENSRDVLIESGGSFSV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2739 183 Pfam Ring finger domain 112 155 IPR001841 -
Mal4g2739 183 SUPERFAMILY RING/U-box 99 162 - -
Mal4g2739 183 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 11 168 - -
Mal4g2739 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 160 IPR013083 -
Mal4g2739 183 CDD RING-H2_EL5_like 112 155 - -
Mal4g2739 183 SMART ring_2 113 154 IPR001841 -
Mal4g2739 183 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Mal4g2739 183 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 168 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2739 Mal-Chr4 77427304 77427855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2739 33 158 C3H Transcription Factor Family AT5G17600 39.695 2.74e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2739 - - aprc:113852327 251.906