Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2719 ATGGAGCAACAACGTGATGTACGAGAAATTGTTGATGATGGTATAGTTTTGACCTTTCGTTGGAATTCTACCAGAAGTCTCTATGAAATGTATCGGCACTTGAGGGATGACAACCAAGCTCCACAAATTGAGGATTGGGACATGCGTCTTTATATGGGACACACTATTTTTCGTGAAAACAATAATTTAAGTGAGCATTTAAGAAGAGAACACCCTGTAAGCACTAGGATTCAAGATGGAGCACCGAGTTCTATTTGTTCCATATGTCTTGAAGATATTTCTGTTGGGTCTCAAGTGATTCAACTGCCCAACCCGTGTTATCATATTTATCATGAAGAGTTCATTATGAGGTGGCTCGGCCGGTCTAACACTTGCCCTTTGTGTCGTAGGCCAATCTTATAA 402 0.4055 MEQQRDVREIVDDGIVLTFRWNSTRSLYEMYRHLRDDNQAPQIEDWDMRLYMGHTIFRENNNLSEHLRREHPVSTRIQDGAPSSICSICLEDISVGSQVIQLPNPCYHIYHEEFIMRWLGRSNTCPLCRRPIL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2719 133 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE 77 131 - -
Mal4g2719 133 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Mal4g2719 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 133 IPR013083 -
Mal4g2719 133 PANTHER SI:CH211-59O9.10 77 131 - -
Mal4g2719 133 Pfam Ring finger domain 86 129 IPR001841 -
Mal4g2719 133 SUPERFAMILY RING/U-box 85 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2719 Mal-Chr4 76548194 76548595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2719 75 130 C3H Transcription Factor Family AT5G66070 47.368 8.11e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2719 - K22753 cam:101490108 153.295