Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2652 ATGAGTAACGCTTTCATTGTTGGTTTGTGCCAAGCTCAGTTTCCACATTGGATTCAACCACGAGACCGCATGTTATTACAAACAAATGGAGCGTTTAAGGTTAATGTCGTTGTTGCTGCCGATGGAAGTGGTTATTATACTAAAGTAATGGATGCAGTATTGGCATCACCTTATAAAAGCATGGAGCGTTATGTGATATTGATAAAGAAGGGTGTGTACATCGAGAATGTTGTCATTCATGATTATAAGTGGAATCTTATGATTATTGGAGAGGGTATAAGTGATACTATTATCTCCGGTAACATGAGCTATGCTTACTTAAGATGTGAACAAAATCGTAATTTTACTACATATAACACCCCTACCTTTGGTAAGAACTCTTCTCCTAGAACTACTTTAATTCTCTCTTGA 411 0.3674 MSNAFIVGLCQAQFPHWIQPRDRMLLQTNGAFKVNVVVAADGSGYYTKVMDAVLASPYKSMERYVILIKKGVYIENVVIHDYKWNLMIIGEGISDTIISGNMSYAYLRCEQNRNFTTYNTPTFGKNSSPRTTLILS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2652 136 PANTHER PECTINESTERASE 9 124 - -
Mal4g2652 136 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 9 124 - -
Mal4g2652 136 Gene3D - 29 132 IPR012334 -
Mal4g2652 136 Pfam Pectinesterase 35 126 IPR000070 GO:0030599|GO:0042545
Mal4g2652 136 SUPERFAMILY Pectin lyase-like 32 127 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2652 Mal-Chr4 72418552 72418962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2652 12 124 Carbohydrate Esterase AT3G43270 46.903 8.46e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2652 K01051 - gmx:100810815 125.561