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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Mal4g2627
ATGGGTCGTGCTCGTGGAAAATTAACTATGAAACACCTTCAAGACGAGAAAGCTCGAAAATCAGCTTTCAATCAGAGAACGAAGGGATTGGCAAAAAAAGTTTCTGAATTTTCTAGCAAGTTTGAAGTTGAAACTTGCTTGATTGTATACGATGGTGATGGTAGACCAATGACTTGGCCACAAGACTCCACAATTGTAGAGTCGATGCTTAAAAATTACGAGCACCAAAAGATTGAGGCAACTCCCAATGAATTCAATATCAAAGACTATTTTGAAAATAGGAAGATTATGGTTGAAGCTGAGATTTCTAAAGTGCGCAAGTTGATTATAAATAACAAGTATCCAACTTGGGGTCCTTGTTTCCAGAACATGGATGCGGAGCAACTCAAAGCCTTCAATGCTATTATAAATGCCAAGATTGAAGCTTGTAATCAAAGAATTAACATGCTGAAAAGTATGAACCAAGGTGATCAAACTAGTCCCATGCATGACACTCCTCAAAGGAAGCATATCCTTGATCATGATCATTTAAAGCAAGTTTATGATGTTAGTGGAATGGTTCAAATGCAATATAGCTCTGATGATCCTTTGAAGCCACTTGATGATATCATTAATGAGACCGTGGATTTCACTAATCAAGATAGTTTGCCTCCTGTTTCATCAACAAACAAAATTGGTGAAGTTGTGGATTTGGATGATCTAATGGTTGAACCTGAGGAATGGGCTAATCAACATGGTGAGTTTGTGGAGTTGGATGATCTAGTGGCTGAGGAATGGAATACTCAACTTGTTAACTTTGATGATGGTTATAATCAACAAGAAAATGATTGGATTAATCAACCTGAAGTGTTCGAATTGCAAGATATTACATTTTTATCTCAGAATGAGCAATAA
894
0.368
MGRARGKLTMKHLQDEKARKSAFNQRTKGLAKKVSEFSSKFEVETCLIVYDGDGRPMTWPQDSTIVESMLKNYEHQKIEATPNEFNIKDYFENRKIMVEAEISKVRKLIINNKYPTWGPCFQNMDAEQLKAFNAIINAKIEACNQRINMLKSMNQGDQTSPMHDTPQRKHILDHDHLKQVYDVSGMVQMQYSSDDPLKPLDDIINETVDFTNQDSLPPVSSTNKIGEVVDLDDLMVEPEEWANQHGEFVELDDLVAEEWNTQLVNFDDGYNQQENDWINQPEVFELQDITFLSQNEQ*
298
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Mal4g2627
297
PANTHER
MADS BOX PROTEIN
5
277
-
-
Mal4g2627
297
Gene3D
-
15
96
IPR036879
GO:0003677|GO:0046983
Mal4g2627
297
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
14
59
IPR002100
GO:0003677|GO:0046983
Mal4g2627
297
MobiDBLite
consensus disorder prediction
1
21
-
-
Mal4g2627
297
SMART
madsneu2
3
62
IPR002100
GO:0003677|GO:0046983
Mal4g2627
297
SUPERFAMILY
SRF-like
5
77
IPR036879
GO:0003677|GO:0046983
Mal4g2627
297
ProSiteProfiles
MADS-box domain profile.
3
63
IPR002100
GO:0003677|GO:0046983
Mal4g2627
297
PANTHER
PROTEIN, PUTATIVE-RELATED
5
277
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Mal4g2627
Mal-Chr4
71438536
71439429
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Mal4g2627
1
145
Type I MADS-box Gene Family
AT5G55690
31.818
1.09e-12
65.1
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Mal4g2627
SRF-TF
1.5e-09
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Mal4g2627
-
-
mtr:MTR_2g049530
249.98
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