Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2626 ATGCGCCTTGCGCATGCTACCATGCGCTTGGGCGCTTTAGGAAGTAAACATGGTTGCATAATGCGCCTAAACAATTTTGCCATGCGCCTGGGCGCTTTAAGCAGTGACCGTACTAACAACAACAATGAAATTTTATCTATAGCTCCATCTCAGAAGACTATAAAGACTCAACTTGGAAAAATTCACAATACTTCATCTGACAGATCAAGTGGATCTCTACCAAGTCAACCTGAAGTTGCAACTCAGAAGAGAAAAAACAAGGAGCAGGTTAATGCCAGTGGCCTAAGAAGTGATAACAAAAATGTTGAGGTGAAAATAAACCGTTCTGTGCTTCATCAAGAAAAGGAAGTTGTATATCTCATGGTCAGTTCCTGCACAAGTAGAGTCTACACAAATGCTATTGTTGGGGTATGCTTCGTAGGTCAAGACATCACTTTTGAGAAAGAGGTTCTAAAAAAATTCATCAAGTTGAAAGGCGATTACAAAGCTATCATGCAGAGTCTTAATCCGCTGATTCCACCAATATTCGCTTCTGATGAGAATGCTTGCTGCTCTGAATGGAATTCAGCCATGGAAAGAGTAACCGGATGGAAAAAGGATGAGGTCATAGGAAAAATGCTTCTTGGGGAAATCTTTGGAGTTTTTGATTCTGAGAAGTCACCATTCGGATTTTACGATAGAAATGGAGAGTTTATAGAGACTTCTATAACAACAAACAAAAGGGAAGATGCAGGTGGAGATATAGTCGGTTGTTTCTTCTTCTTGCAGATTGTAACGGAAGATTTCAATCAACCCTCTCAAGGACACAGTTCTAAATGCCGAGAAAGGATCTCAGAATCTAAGGAGTTATCTTTATATACTACAAGAGATGAAGAACCCTTTAAATGGTATCCTATTCACACACAAACTTTTGGAGAATACAGACATCTCCGAAAACCAGAAACAAATTCTTGA 954 0.3952 MRLAHATMRLGALGSKHGCIMRLNNFAMRLGALSSDRTNNNNEILSIAPSQKTIKTQLGKIHNTSSDRSSGSLPSQPEVATQKRKNKEQVNASGLRSDNKNVEVKINRSVLHQEKEVVYLMVSSCTSRVYTNAIVGVCFVGQDITFEKEVLKKFIKLKGDYKAIMQSLNPLIPPIFASDENACCSEWNSAMERVTGWKKDEVIGKMLLGEIFGVFDSEKSPFGFYDRNGEFIETSITTNKREDAGGDIVGCFFFLQIVTEDFNQPSQGHSSKCRERISESKELSLYTTRDEEPFKWYPIHTQTFGEYRHLRKPETNS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2626 317 ProSiteProfiles PAS repeat profile. 160 212 IPR000014 -
Mal4g2626 317 Pfam PAS fold 160 213 IPR013767 GO:0006355
Mal4g2626 317 MobiDBLite consensus disorder prediction 59 98 - -
Mal4g2626 317 Gene3D PAS domain 174 247 - -
Mal4g2626 317 PRINTS Phytochrome signature 142 162 IPR001294 GO:0006355|GO:0009584
Mal4g2626 317 PRINTS Phytochrome signature 122 139 IPR001294 GO:0006355|GO:0009584
Mal4g2626 317 MobiDBLite consensus disorder prediction 59 80 - -
Mal4g2626 317 CDD PAS 171 256 IPR000014 -
Mal4g2626 317 PANTHER PHYTOCHROME B-RELATED 85 285 - -
Mal4g2626 317 PANTHER TWO-COMPONENT HISTIDINE KINASE 85 285 - -
Mal4g2626 317 SUPERFAMILY PYP-like sensor domain (PAS domain) 174 253 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2626 Mal-Chr4 71430430 71432592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2626 84 284 Histidine Kinase Gene Family AT2G18790 43.860 1.98e-57 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2626 K12123 - gmx:100808192 265.388