Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2622 ATGCGCCTTGCGCATGCTACCATGCGCTTGGGCGCTTTAGGAAGTAAACATGGTTGCATAATGCGCCTAAACAATTTTGCCATGCGCCTGGGCGCTTTAAGCAGTGACCGTACTAACAACAACAATGAAATTTTATCTATAGCTCCATCTCAGAAGACTATAAAGACTCAACTTGGAAAAATTCACAATACTTCATCTGACAGATCAAGTGGATCTCTACCAAGTCAACCTGAAGTTGCAACTCAGAAGAGAAAAAACAAGGAGCAGGTTAATGCCAGTGGCCTAAGAAGTGATAACAAAAATGTTGAGGTGAAAATAAACCGTTCTGTGCTTCATCAAGAAAAGGAAGTTGTATATCTCATGGTCAGTTCCTGCACAAGTAGAGTCTACACAAATGCTATTGTTGGGGTATGCTTCGTAGGTCAAGACATCACTTTTGAGAAAGAGGTTCTAAAAAAATTCATCAAGTTGAAAGGCGATTACAAAGCTATCATGCAGAGTCTTAATCCGCTGATTCCACCAATATTCGCTTCTGATGAGAATGCTTGCTGCTCTGAATGGAATTCAGCCATGGAAAGAGTAACCGGATGGAAAAAGGATGAGGATTCTGAGAAGTCACCATTCGGATTTTACGATAGAAATGGAGAGTTTATAGAGACTTCTATAACAACAAACAAAAGGGAAGATGCAGGTGGAGATATAGTCGGTTGTTTCTTCTTCTTGCAGATTGTAACGGAAGATTTCAATCAACCCTCTCAAGGACACAGTTCTAAATGCCGAGAAAGGATCTCAGAATCTAAGGAGTTATCTTTATATACTACAAGAGATGAAGAACCCTTTAAATGGTATCCTATTCACACACAAACTTTTGGAGAATACAGACATCTCCGAAAACCAGAAACAAATTCTTGA 912 0.3969 MRLAHATMRLGALGSKHGCIMRLNNFAMRLGALSSDRTNNNNEILSIAPSQKTIKTQLGKIHNTSSDRSSGSLPSQPEVATQKRKNKEQVNASGLRSDNKNVEVKINRSVLHQEKEVVYLMVSSCTSRVYTNAIVGVCFVGQDITFEKEVLKKFIKLKGDYKAIMQSLNPLIPPIFASDENACCSEWNSAMERVTGWKKDEDSEKSPFGFYDRNGEFIETSITTNKREDAGGDIVGCFFFLQIVTEDFNQPSQGHSSKCRERISESKELSLYTTRDEEPFKWYPIHTQTFGEYRHLRKPETNS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2622 303 PANTHER PHYTOCHROME B-RELATED 201 271 - -
Mal4g2622 303 PANTHER PHYTOCHROME B-RELATED 85 201 - -
Mal4g2622 303 MobiDBLite consensus disorder prediction 59 98 - -
Mal4g2622 303 ProSiteProfiles PAS repeat profile. 160 201 IPR000014 -
Mal4g2622 303 Pfam PAS fold 160 211 IPR013767 GO:0006355
Mal4g2622 303 MobiDBLite consensus disorder prediction 59 80 - -
Mal4g2622 303 SUPERFAMILY PYP-like sensor domain (PAS domain) 174 239 IPR035965 -
Mal4g2622 303 PRINTS Phytochrome signature 122 139 IPR001294 GO:0006355|GO:0009584
Mal4g2622 303 PRINTS Phytochrome signature 142 162 IPR001294 GO:0006355|GO:0009584
Mal4g2622 303 PANTHER TWO-COMPONENT HISTIDINE KINASE 201 271 - -
Mal4g2622 303 PANTHER TWO-COMPONENT HISTIDINE KINASE 85 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2622 Mal-Chr4 71413518 71415680 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2622 84 270 Histidine Kinase Gene Family AT2G18790 39.912 4.67e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2622 K12123 - gmx:100808192 239.58