Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2612 ATGTGCAGAGAAAAATCCTTGTTATGCTTCCTCAAAATTGTAATGGTAGTTGTTCTACTACTGCTTCATCATCATGAAAAATGTGATGCAATTACTACTAATAATCAAACATCATGTACACCTTCCTCATGTGGCAAAATCAACAACATAAAACATCCGTTTCGACTTAAGAATGACCCAACAACATGCGGTGATCCAATGTATGAGTTATCCTGCGAAAACAACATCACAACCTTAACTCTATTTTCGGGTAAATACTATGTGAAGTCAATCAACTACAAAAACTACACAATTCGGTTAGTAGATCCCGGAATTCAAGAAAATGATTGTTCCACCATTCCTCGTTATTTCTTAACCTCATTGAATTTCACAAGTTATTACGACGATAACTACCACGGGGATCCATACGAAGTAAGTTATCCCGCTTGGTTGGGGCATATAATATACTTGAACTGTAGCAATCCAGTAAAGAATGATCGTAGGTATGTTGAGACATCTCCGTGTATAATCAACTCGACCGCTGATGGTGCTGGCCATGTGTATGCTATTGCTGGAGACTTAAGTGCTGGAAGATTAAACGTTGGTTGCCATGTGAAGCTTGTTGCTACATCATCAGCTTCTGCTTTTAAGCCTGTTAGTGCTGACCCGAATGATATTAGCGTTTATCACAAACATTTTTCCTACAAGGAAATTCATGAAATGCTAAGCTATGGATTTTACCTTTCGTGGTTAAGATATGCTTGTGATAAAGCTTGTGATGATAGTAACAAACAGTACTGCTACTTCAATGAAACCACCGGAGATCTTCTATGTACATCTGGTTTTTGCAAGACTCCATTGGGACTTGACATCCAATGTGAACACATGTCAAAGTTGCGCATATTGATGGAAGGTGTACTCAGAATAGTTGGCACAACAAAAAGCTCAAAATTAGATAAGAAATTTTCCGATTCTAAATTTGTCACTGAGATAGGAAAACTGACTGGCAGGTATCTCTTGCCATCATTTACAGTGAAATTTACATTGGGCCTCATATGTTTCTTTGTGCTATTTATATATACATGTCGAAGAAGACATATCTCCATTTACGAGAATATTGAAGTTTTTCTTCGTGGGAGTACTTTGATGCCAATAAGGTATTCATACAAAGATATAAAGAAGATGACAAGAGGTTTCAAGGATAAGCTGGGTGAAGGAGGCTTTGGTTCTGTTTATAAAGGTAAGTTAAGTAGTGGGTCATTTGTTGCCATAAAGATGTTGGGTAAACCTAAGGGTAATGGACAAGATTTTATTAGCGAAGTCGCAACTATAGGAAGAATACACCATGCCAATGTGGTGAGACTTATTGGATTTTGTGTTGAGAGATCAAAACGTGCACTTGTTTATGAATTCATGCCTAATAGCTCTCTTGATAAATATATTTCGTCTAAAGCGGATGCTATCTCCCTAACTTCTAAGAAAATGTATGAGATATCTCTTGGAGTTGCTCGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATCTTGCATTTTGATATTAAACCCCATAACATCCTTTTGGATGAGAACTTTATCCCTAAGGTTTCAGACTTTGGTCTTGCAAAACTTTATCCTAATGACAATAGTATTGTCACTTTAACTGCAGCAAGAGGAACAATTGGTTACATGGCCCCTGAATTGTTCTACAAAAATATTGGAGGAGTATCCTACAAGGCAGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGAAAAGAAATTTGAATCCACATGTGGATCGTTCAAGCCAACTTTTCTTTCCCACTTGGATTTATAATCAATTGGTTGAAGAAAGGGAGATAGAAATGGATGAAATTACAATCGAGGAAAAAAATAATGTGAAGAAGATGTTCATAATTGCATTGTGGTGTATACAATTGAAACCAAGTGATCGCCCTACAATGAACAAAGTGATAATGATGCTTGAAGGAGATATTGAGAGTATTGAAATGCCTCCAAAGCCTTCTTTGTATCCAGAGGAAATGATTCAAGAAGATCTTGAAGTTGACTCTGATGAAATTGACGAATCCAGTTCTACTTTTGGGTCTACTAGTTTTACTGAGGAAACTACAACAAAGCCTTTATTGATTAATTCTGTTGAAAAAGGACGATCAACCTAA 2175 0.3674 MCREKSLLCFLKIVMVVVLLLLHHHEKCDAITTNNQTSCTPSSCGKINNIKHPFRLKNDPTTCGDPMYELSCENNITTLTLFSGKYYVKSINYKNYTIRLVDPGIQENDCSTIPRYFLTSLNFTSYYDDNYHGDPYEVSYPAWLGHIIYLNCSNPVKNDRRYVETSPCIINSTADGAGHVYAIAGDLSAGRLNVGCHVKLVATSSASAFKPVSADPNDISVYHKHFSYKEIHEMLSYGFYLSWLRYACDKACDDSNKQYCYFNETTGDLLCTSGFCKTPLGLDIQCEHMSKLRILMEGVLRIVGTTKSSKLDKKFSDSKFVTEIGKLTGRYLLPSFTVKFTLGLICFFVLFIYTCRRRHISIYENIEVFLRGSTLMPIRYSYKDIKKMTRGFKDKLGEGGFGSVYKGKLSSGSFVAIKMLGKPKGNGQDFISEVATIGRIHHANVVRLIGFCVERSKRALVYEFMPNSSLDKYISSKADAISLTSKKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDNSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKKRNLNPHVDRSSQLFFPTWIYNQLVEEREIEMDEITIEEKNNVKKMFIIALWCIQLKPSDRPTMNKVIMMLEGDIESIEMPPKPSLYPEEMIQEDLEVDSDEIDESSSTFGSTSFTEETTTKPLLINSVEKGRST* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2612 724 MobiDBLite consensus disorder prediction 694 724 - -
Mal4g2612 724 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 690 - -
Mal4g2612 724 Gene3D Transferase(Phosphotransferase) domain 1 465 675 - -
Mal4g2612 724 SUPERFAMILY Protein kinase-like (PK-like) 375 660 IPR011009 -
Mal4g2612 724 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
Mal4g2612 724 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 690 IPR045874 GO:0004672
Mal4g2612 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Mal4g2612 724 MobiDBLite consensus disorder prediction 688 724 - -
Mal4g2612 724 Gene3D Phosphorylase Kinase; domain 1 371 464 - -
Mal4g2612 724 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Mal4g2612 724 Pfam Protein kinase domain 393 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2612 724 SMART serkin_6 390 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2612 724 ProSiteProfiles Protein kinase domain profile. 390 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2612 Mal-Chr4 71046542 71076697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2612 18 676 Receptor kinase-like Gene Family AT5G38260 34.529 2.79e-110 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal4g2612 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2612 - - mtr:MTR_1g027830 891.338