Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2603 ATGCATCTTTCTCTACACAACACAATGTTCCCAGCTGCTAGAACCATAGCTCTACACTCATCTTCCCTATGCACAGTCTCTTCTGATAAACCATCATCACCTCCTTCAACTCATTTAACTCCCAAACCCAAAAGCCTCCTTCAAAACCACCCACTTTACACACAAACTCATGAAAAAATCTCACTTCAATTCAAAGAAAAAATCCTTTGTCTTGAAGTTATGGGCATTGATTCAGGTAAAGCACTCTCCCAAAATCCTAACCTTCACACAGCTTCCTTAGAATCCATTCATTCCATTATCACCTTCCTTCTCTCCAAAGGCATCCAACATAATGACCTTCCAAGAATCTTTGGCATGTGTCCTAAGATTCTCACTTCAAGCATCAAAACTGATCTTAACCCAGTTTTTGATTTTCTCATGCAGGATCTTAAAGTGCCTGATCATAGCTTTAGAAAAGTTATTAAAAAGTGTCCAAGATTGCTTACATCTAGTGTGGTGGATCAGCTTAAACCAGCTTTGTTTTATCTTAAGAGATTAGGATTAAGGGATTTAGAAGCTCTGGCTTATCAAGATTCTGTTCTTTTGGTTTCCAATGTTGAAAGGACACTTATTCCTAAACTTAAGCATTTGGAGAGTATGGGATTTACTAAAGAAGAAGCTAGATGTATGGTGTTGAGGTGTCCTGCATTGTTGACTCTTAGTATTGAGAATAATTTTCAGCCAAAATTTGAGTATTTTTCTGTGGAAATGGAAGGGAAATTGGAGGAGTTGAAAGAGTTTCCTCAATATTTCTCTTTTAGTTTGGAGAATAGGATAAAGATTAGACATATGGAGGTTGTTGAAAGTGGGGTCAATTTGCCTTTGTCATTGATGCTTAAAAGTACTGATGATGAGTTTAGGGAGTTGATAAAAAAGGGGGCTGGATGA 927 0.3743 MHLSLHNTMFPAARTIALHSSSLCTVSSDKPSSPPSTHLTPKPKSLLQNHPLYTQTHEKISLQFKEKILCLEVMGIDSGKALSQNPNLHTASLESIHSIITFLLSKGIQHNDLPRIFGMCPKILTSSIKTDLNPVFDFLMQDLKVPDHSFRKVIKKCPRLLTSSVVDQLKPALFYLKRLGLRDLEALAYQDSVLLVSNVERTLIPKLKHLESMGFTKEEARCMVLRCPALLTLSIENNFQPKFEYFSVEMEGKLEELKEFPQYFSFSLENRIKIRHMEVVESGVNLPLSLMLKSTDDEFRELIKKGAG* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2603 308 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 SMART mt_12 114 146 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 SMART mt_12 185 216 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 SMART mt_12 43 77 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 SMART mt_12 79 109 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 SMART mt_12 221 253 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 Gene3D Transcription termination factor 3, mitochondrial 166 305 IPR038538 -
Mal4g2603 308 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 305 - -
Mal4g2603 308 MobiDBLite consensus disorder prediction 27 47 - -
Mal4g2603 308 Pfam mTERF 152 299 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 Pfam mTERF 71 183 IPR003690 GO:0003690|GO:0006355
Mal4g2603 308 PANTHER CGI-12 PROTEIN-RELATED 25 305 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2603 Mal-Chr4 70847961 70848887 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g2603 mTERF 3.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2603 K15032 - gmx:100788221 468.774