Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2602 ATGACGTCACGTTCGTCGCATAGCAACGGAAGCAGCAACGGCGGACGTGCTAAAGCTGGGAAGTATGAGCTGGGTAGGACGCTAGGTGAAGGAAATTTTGCCAAGGTCAAATTTGCGAGGCACGTCGATACCGGTGATCATGTTGCTATCAAGATTCTTGATAAGGAAAAAATTCTCAAGCATAAAATGATTCGTCAGATAAAACAAGAAATATCAACAATGAAACTGATTAGACACCCAAATGTCATACGCATGCATGAGGTAATAGCTAACAAGTCAAAGATATTTATTGTAATGGAACTTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCTCGCAGTGGGAGGTTGAAAGAAGATGAAGCAAGAAAATATTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCACAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAACGCTTAAAGTATCGGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGTGGTACACCAAATTACGTTGCTCCAGAGGTGATCCAAAACAAAGGGTATGATGGTGCAATTGCAGATCTCTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAGACAATCTTGTAGCTTTATATAAAAAGATTTTCAAGGCTGATTTCTCCTGTCCTCCATGGTTCTCATCAAGTGCAAAGAAACTAATCAAAAGAATCCTTGATCCCAGTCCTATCACACGGATAAAAATTGCTGAGGTCATTGAAAATGAGTGGTTCAAGAAGGGATATAAACCTCCTGTGTTTGAACAGGCCGATGTTAGTCTTGATGATGTAAATTCTATTTTCAATGGTTATATGGATTCAGATAATGTTGTTGTTGAGAGGCATGAAGAGGGGCCTGTTGCACCTGTGACCATGAATGCGTTTGAACTTATCTCTAAGTCTCAAGGCCTCAACCTTAGTAGTCTTTTCGAGAAGCAAATGGGACTTGTTAAAAGGGAAACGAGATTCACATCCAAATGTTCAGCAAATGAGATAATTTCAAAAATCGAGAAAACTGCAGGACCTCTGGGTTTTGATGTCAAAAAGAACAACTGCAAGTTAAGGATTTATGGGGAAAAGACAGGACGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTGGAGGTGGCCCCTTCAATTTACATGGTTGAGATGCGAAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAAAGTATAACTACTGGGCTGAAAGATATTGTTTGGAAAGCAGATCTTATTGCTGAAGAAAACGATGATGGTGGCAGTACCTCAAAATAA 1383 0.4042 MTSRSSHSNGSSNGGRAKAGKYELGRTLGEGNFAKVKFARHVDTGDHVAIKILDKEKILKHKMIRQIKQEISTMKLIRHPNVIRMHEVIANKSKIFIVMELVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGTLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIQNKGYDGAIADLWSCGVILFVLMAGYLPFEEDNLVALYKKIFKADFSCPPWFSSSAKKLIKRILDPSPITRIKIAEVIENEWFKKGYKPPVFEQADVSLDDVNSIFNGYMDSDNVVVERHEEGPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSANEIISKIEKTAGPLGFDVKKNNCKLRIYGEKTGRKGHLSVATEILEVAPSIYMVEMRKSEGDTLEFHKFYKSITTGLKDIVWKADLIAEENDDGGSTSK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2602 460 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2602 460 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Mal4g2602 460 Pfam NAF domain 321 381 IPR004041 GO:0007165
Mal4g2602 460 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Mal4g2602 460 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g2602 460 Gene3D Kinase associated domain 1, KA1 319 444 - -
Mal4g2602 460 MobiDBLite consensus disorder prediction 1 15 - -
Mal4g2602 460 CDD STKc_SnRK3 21 276 - -
Mal4g2602 460 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Mal4g2602 460 Gene3D Phosphorylase Kinase; domain 1 11 101 - -
Mal4g2602 460 CDD CIPK_C 325 433 - -
Mal4g2602 460 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 449 - -
Mal4g2602 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Mal4g2602 460 PANTHER SERINE/THREONINE KINASE 16 449 - -
Mal4g2602 460 Gene3D Transferase(Phosphotransferase) domain 1 102 284 - -
Mal4g2602 460 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2602 460 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2602 Mal-Chr4 70840554 70846509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2602 11 452 CBL-interacting serine-threonine protein kinases AT1G01140 66.741 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal4g2602 Pkinase 3.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2602 - - gmx:100788746 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4542 5 117642187 117643752 Mal4g2602 4 70840554 70846509 PCT