Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2596 ATGGGGAGGAAAAAGAAACAAGAAGGAGAAACAAGTGAAGAAAATGGGAATCATAGTAACGGCAGTGATAAAAGTCCGAATGCGTATGATAATGATACTTTGGTATTTATAGCCACGGCTCAAGAGTTGAAGGAAGAAGGTAATAAGATGTTTCAGAAGAGGGATATTCGAGGAGCTATGGTGAAATATGAGAAAGCTCTCAAATTGCTTCCGACAAATCATATAGATGTGTCATATGTGCGGAGTAATATGGCTGCGTGTTATATGCAGATGGGACTTGGTGAGTACCCTAGGGCAATTAATGAATGCAATTTGGCTCTTGAAGTTACTCCGAAATACAGTAAAGCTCTGTTGAAGAGAGCGAGGTGTTATGAGGCTTTGAATAGACTGGATTTAGCATTGAGAGATGTTAGTACTGTTTTGAAAATTGAGCCGAATAATATTATGGCGTTGGAGATCTCGGATAAGGTAAAAAGTGCACTTGAAGATAGAGGGTTAAGAGTAAACGATGAGCAAATTGAGTTGCCTCCGGATTATGTCGAACCATCTTTTGACGTGTCTTCTGAAAAGGCAGTGAAAGAAAAGAAACACAAGAAGAAGAGTAAAAAAGAGAAGGTGAAGGCTTCCGATGAAATTGTAGAGAAGCAAGCTGAGGAGAAACTAGAAGAGAAGAAAGATGAGGAAAATGTTGCAGCAAATAAGGCTGAGGACGATCATCTCAAAGAGAAAAAGTGTAATAAATCAAAAAAGAAGGCAGTGAAGGAAAAAATTGATAAGCAGAAAGAGGATGTTAAGGAGGTCAATGAAGAAAAATGTAATGGTAGAAGCATAGATGTACCTAAGAAAACAGCAAAACTTGTTTTTGGTGATGATATAAGATGGGCTCAATTGCCGGTTAATTGCAGCCTTTTTCAGCTAAGAGAAGTTATATGTGACAGGTTCCCAAGCCTAGGAGCAGTTCTTGTCAAATATAAAGATCAGGAAGGTGATTTGATCACAATCACTTCGGATGAAGAATTGAAGTGGGCTGAAACAGGATCACAGGGTTCTATCCGACTATATATAGTAGAAGCTAATCCTAATCATGATCCATTCTATGAGAAACTTCATCTGAAGGATGTGGTAAAGGTTGAAATGGATAATGCTCCTAAGAACGGTTGCGTGGTGAAATCAAAGGAAATTATTAGCTTTTCTTGTGTTGAGGATTGGATAATTCAGTTCGCACAACTGTTCAAGAATCACGTTGGGTTTGAATCCGACAGATACTTAGATTTTCATGAACTTGGGATGAAGCTCTATTCAGAGGCTGTGGAAGAGACGGTTACAAGCGAAGAAGCGCAAGGCCTGTTTGACATGGCAGGAGGTAAGTTCCAAGAGATGACAGCTCTAGCATTGTTTAATTGGGGAAATGTGCATATGTCTAGGGCAAGGAAGAAAGTGTATTTAACCGAAGATTCTTCTAAAGAGCATATGTATGAACAAATTAAAAGTTCGTATGACTGGGCGCAAAAAGAATATGCAAAAGCTGGAGAAAAATTTGAAGCAGCCATTAAAATTAAGTCAGATTTTTACGAAGGCTTCCTTGCTCTAGGTCAGCAGCGGTTCGAACAAGCAAAACTTTCTTGGTATTATGCACTCAGTAGTAATATTGATTTACCGACATGGCCCTCCACAGAGGTTCTTCATCTTTACAACAATGCTGAGGAGAATATGGAAAAAGGAATGCTGATATGGGAAGAATCGCAAGAGCAGCAGCTGAGTGAAACCTCCACTACCGGGTTGGATGGGTTATTTAAAAATATGTCATCAGATGAAACTGCTGCGCTGGCGGCAAACATGAGGTCACAGATAAATCTCTTGTGGGGCACTATGCTATATGAACGCTCAATTGTGGAATTCAAATTAGGGCTACCTGTATGGCATGAATCATTGGAAGTTGCAATTGAGAAGTTTGAACATGCAGGAGCTTCTCCAACAGATATAGCTGTAATGTTGAAAAATCACTGTTCAAATAACAATGCTGTAGATGGTCTAGGTTTCAAAATTGATGAAATAGTACAGGCATGGAATGAGATGTATGAAGCAAAAAAGTTGCAGAAGGGAGTTTCATCCTTTCGTTTGGAACCCTTGTTCAGAAGAAGAGTATCGAAAATTTACCATGCCTTTGAGCTTGTATGA 2178 0.3926 MGRKKKQEGETSEENGNHSNGSDKSPNAYDNDTLVFIATAQELKEEGNKMFQKRDIRGAMVKYEKALKLLPTNHIDVSYVRSNMAACYMQMGLGEYPRAINECNLALEVTPKYSKALLKRARCYEALNRLDLALRDVSTVLKIEPNNIMALEISDKVKSALEDRGLRVNDEQIELPPDYVEPSFDVSSEKAVKEKKHKKKSKKEKVKASDEIVEKQAEEKLEEKKDEENVAANKAEDDHLKEKKCNKSKKKAVKEKIDKQKEDVKEVNEEKCNGRSIDVPKKTAKLVFGDDIRWAQLPVNCSLFQLREVICDRFPSLGAVLVKYKDQEGDLITITSDEELKWAETGSQGSIRLYIVEANPNHDPFYEKLHLKDVVKVEMDNAPKNGCVVKSKEIISFSCVEDWIIQFAQLFKNHVGFESDRYLDFHELGMKLYSEAVEETVTSEEAQGLFDMAGGKFQEMTALALFNWGNVHMSRARKKVYLTEDSSKEHMYEQIKSSYDWAQKEYAKAGEKFEAAIKIKSDFYEGFLALGQQRFEQAKLSWYYALSSNIDLPTWPSTEVLHLYNNAEENMEKGMLIWEESQEQQLSETSTTGLDGLFKNMSSDETAALAANMRSQINLLWGTMLYERSIVEFKLGLPVWHESLEVAIEKFEHAGASPTDIAVMLKNHCSNNNAVDGLGFKIDEIVQAWNEMYEAKKLQKGVSSFRLEPLFRRRVSKIYHAFELV* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2596 725 Coils Coil 250 270 - -
Mal4g2596 725 Gene3D - 283 358 - -
Mal4g2596 725 MobiDBLite consensus disorder prediction 190 209 - -
Mal4g2596 725 MobiDBLite consensus disorder prediction 219 241 - -
Mal4g2596 725 Gene3D Tetratricopeptide repeat domain 38 164 IPR011990 GO:0005515
Mal4g2596 725 Coils Coil 198 238 - -
Mal4g2596 725 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Mal4g2596 725 MobiDBLite consensus disorder prediction 1 28 - -
Mal4g2596 725 SUPERFAMILY TPR-like 40 152 IPR011990 GO:0005515
Mal4g2596 725 CDD PB1 289 355 - -
Mal4g2596 725 PANTHER PROTEIN CLMP1 3 724 IPR044517 -
Mal4g2596 725 SUPERFAMILY CAD & PB1 domains 284 367 - -
Mal4g2596 725 Pfam PB1 domain 283 356 IPR000270 GO:0005515
Mal4g2596 725 PANTHER PROTEIN PHOX3 3 724 - -
Mal4g2596 725 ProSiteProfiles PB1 domain profile. 281 358 IPR000270 GO:0005515
Mal4g2596 725 SMART tpr_5 40 73 IPR019734 GO:0005515
Mal4g2596 725 SMART tpr_5 78 113 IPR019734 GO:0005515
Mal4g2596 725 SMART tpr_5 114 147 IPR019734 GO:0005515
Mal4g2596 725 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Mal4g2596 725 MobiDBLite consensus disorder prediction 14 28 - -
Mal4g2596 725 SMART PB1_new 281 358 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2596 Mal-Chr4 70202904 70205158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2596 23 147 Calmodulin-binding Proteins AT3G25230 33.577 5.91e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2596 - - gmx:100820306 1082.78