Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2552 ATGGGAAAATGTTGGTTTGTTGGGGTGTTAATTGTGGTGGGTTTTAGGTGCTTGTTGGGAACAACAATTGGGGTAGAAGGGTACCCAATTGAGGATTTGGTTGTGAGACTACCAGGCCAACCTAAGGTTAAATTTAGTCAATATGCAGGCTATGTTGATATAGATGTAAAACATGGGAGGAGCTTCTTTTACTATTTGGTTGAGGCTGAACATCACCCTCACAAAAAGCCTCTCACTCTTTGGCTCAATGGAGGTCCAGGGTGTTCCTCCATTGGAGGAGGTGCCTTTACAGAATTGGGTCCGTTTTATCCAACTGGTGATGGACGCGGTCTACGAAGGAATTCAAAGTCTTGGAATAGAGCTTCTAATCTCCTTTTTGTGGAATCTCCTGTTGGAGTTGGTTGGTCATACTCAAATACAACATCTGATTATAACTCCGATGATGCATCCACAGCCAATAATATGCTTTTGTTTATGCTGAAGTGGTACGAGAAGTTTCCTTCCTACAGATCAAAAGGGTTGTTTCTTACCGGTGAAAGCTATGCAGGGCATTACATACCTCAGTTAACCACGGCTCTTCTCGACTATAATGCTCATTCAACGGATTTCAAGGTCAATATAAAAGGAGTCGCTATTGGAAACCCACTCCTGAGATGGGATCATGATAGAAAAACAACTTTTGAATACTTCTGGTCACATGGAATGCTTTCTGATGAAATTGGCCTTGCCATTATGAATGATTGCAATTTTGATGATTATACCTATGAAGATCCTCATAACGTATCCAACTCATGCAACGATGCCCTAAATGATGCGAATAAAATTGTGGGCAATTATGTAGACGTTTATGATGTGATTCTTGATAAATGTTATCCAAACATAGCTGAACAACAACTGAGATTGAAAAAGATGGCAACTAAAATAAGTTTAAGTGTAGATGTCTGTATGGAGGAAGAAAGCTATTTTTACCTCAACCTCCCTGAGGTTCAAAAGGCTCTCCATGCTAACCGTACCAATCTTCCGTATCCATGGTCCATGTGCAGTGATGTTTTAAATTACAGTAAGACGGATCCTAATATTAATATGCTTCCAATTCTCAAACGGATTGTTCAAAACCATATTCCACTATGGGTTTACAGTGGAGACCAAGATTCAGTTGTGCCATTTCTAAGTTCTCGAACACTCATTCGTGAACTTGCTCATGACCTAAAATTCAAGGTTACCGACCCATATAGAGTTTGGTTCCATGAAGGGCAGATTGGTGGTTGGGTAACTGAGTATGGAAATTTGTTGACTTTTGCCACCGTAAGAGGAGCAGGTCACATGGTACCATATGCACAACCTTCTAGAGCATTGAATCTATTTAGTTCATTTGTGCGTGGAAGGAGATTGTCAAACACAACTCAACCTTCAATTGGTGAATAA 1425 0.4035 MGKCWFVGVLIVVGFRCLLGTTIGVEGYPIEDLVVRLPGQPKVKFSQYAGYVDIDVKHGRSFFYYLVEAEHHPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRRNSKSWNRASNLLFVESPVGVGWSYSNTTSDYNSDDASTANNMLLFMLKWYEKFPSYRSKGLFLTGESYAGHYIPQLTTALLDYNAHSTDFKVNIKGVAIGNPLLRWDHDRKTTFEYFWSHGMLSDEIGLAIMNDCNFDDYTYEDPHNVSNSCNDALNDANKIVGNYVDVYDVILDKCYPNIAEQQLRLKKMATKISLSVDVCMEEESYFYLNLPEVQKALHANRTNLPYPWSMCSDVLNYSKTDPNINMLPILKRIVQNHIPLWVYSGDQDSVVPFLSSRTLIRELAHDLKFKVTDPYRVWFHEGQIGGWVTEYGNLLTFATVRGAGHMVPYAQPSRALNLFSSFVRGRRLSNTTQPSIGE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2552 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Mal4g2552 474 Pfam Serine carboxypeptidase 39 461 IPR001563 GO:0004185|GO:0006508
Mal4g2552 474 Gene3D - 315 351 - -
Mal4g2552 474 SUPERFAMILY alpha/beta-Hydrolases 25 467 IPR029058 -
Mal4g2552 474 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Mal4g2552 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 466 IPR001563 GO:0004185|GO:0006508
Mal4g2552 474 Gene3D - 362 461 - -
Mal4g2552 474 Gene3D alpha/beta hydrolase 30 291 IPR029058 -
Mal4g2552 474 PANTHER CARBOXYPEPTIDASE 6 466 - -
Mal4g2552 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Mal4g2552 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Mal4g2552 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Mal4g2552 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2552 Mal-Chr4 68635426 68638820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2552 322 464 Calmodulin-binding Proteins AT2G22960 29.371 1.96e-14 69.7