Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2533 ATGGAACCAGAACAACCACCACTTCAACCACCGACCGTTACGGCGGTGCACGACGGAAGCGGCGACGAAGGTTTAGCCGCATTAGGCGAAGGTGGCGGTGATGGTGGTAACGGTAGCAAAGTGAAAGGTCCTTGGTCTCCTGAAGAAGACGCCATTCTCAGCCGTCTTGTTAGTCAGTTCGGTGCTAGAAACTGGAGTTTGATCGCTCGTGGGATTTCTGGAAGATCCGGGAAGTCGTGTCGCTTGAGATGGTGTAATCAACTTGACCCCTCTGTTAAACGGAAACCCTTCACTGATGAAGAGGACCGGATCATAGTTGCTGCTCATGCAATCCATGGAAACAAATGGGCAGCCATTGCCAGGCTTCTACCAGGAAGAACAGACAATGCCATTAAGAACCACTGGAATTCTACTTTGAGGCGTCGTGGAGTTGAACATGATAATATGAAGTTTGAATCTGGAAATGTGGCAGGAAATACTAGCTTGGAGAAAGCCAAAGCATCATCAGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGTTCTATGGAGATTGTGACCGATAAAAATGAAGACAGAGCAAGGACTGATGTTCAATTATACCATGAAGTCAGGGATCCACCGACCCTTTTTAAGCCAGTAGCACGTGTAAGTGCTTTTAACGCATACAATGCTTTCAATGGTTCACAGCCTTCAACATCAGTTCCAAGACCTGTTCCAATGCAAGGACCTATTTTACATTCGCCAAAATCAGATATGGAAATTTGTAAAATGCTTAACGGAACTAATGTCGACCGGTCAGTGCCTAACCAGTGTGGTCATGGATGCTGTTCATCTCTAAATGGTAACAACTCCAAAAGCTCTTTGTTGGGACCAGATTTCATTGAATATTCAGAACCTCAATCTTTCCCAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGATACTGCTGGCAGGGTTAATATCTAA 1056 0.4432 MEPEQPPLQPPTVTAVHDGSGDEGLAALGEGGGDGGNGSKVKGPWSPEEDAILSRLVSQFGARNWSLIARGISGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDNMKFESGNVAGNTSLEKAKASSEETLSCGDVNSLKSSEGRDVSSMEIVTDKNEDRARTDVQLYHEVRDPPTLFKPVARVSAFNAYNAFNGSQPSTSVPRPVPMQGPILHSPKSDMEICKMLNGTNVDRSVPNQCGHGCCSSLNGNNSKSSLLGPDFIEYSEPQSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVNI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2533 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 88 IPR017930 -
Mal4g2533 351 Gene3D - 96 142 - -
Mal4g2533 351 SMART sant 41 90 IPR001005 -
Mal4g2533 351 SMART sant 93 141 IPR001005 -
Mal4g2533 351 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Mal4g2533 351 PANTHER MYB PROTEIN-RELATED 18 334 - -
Mal4g2533 351 PANTHER - 18 334 - -
Mal4g2533 351 CDD SANT 96 139 IPR001005 -
Mal4g2533 351 SUPERFAMILY Homeodomain-like 40 135 IPR009057 -
Mal4g2533 351 Gene3D - 41 93 - -
Mal4g2533 351 MobiDBLite consensus disorder prediction 1 46 - -
Mal4g2533 351 CDD SANT 44 86 IPR001005 -
Mal4g2533 351 Pfam Myb-like DNA-binding domain 45 102 - -
Mal4g2533 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Mal4g2533 351 ProSiteProfiles Myb-like domain profile. 37 88 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2533 Mal-Chr4 67565020 67576701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2533 36 349 MYB Transcription Factor Family AT3G09230 50.617 1.45e-102 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g2533 Myb_DNA-bind_6 4.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2533 K09422 - gmx:100811740 486.493