Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2530 ATGGCTAGTCATGAGGGTTTTGAAGGTTACCATGTCCCACAACAAAGTAGAAGAGATAAGCTTAGAGTTGTTGTGGCTCAAAATCAAAACCAACCTCATGAACCTTTGCTTCCTTTCTACGATTCTTCTTCTTTCATTACTAATTATAATCAACAAGGTTTGAAACCAAATTCATGTTCTTCTTCTAATTCTATGAAGGATTTAGAGTGTTCTAATTTGATGATGCGTTTTTCTAGAGAAGATCAAGGAAAAAGGGTCATGAATATTTCTTCTTCTAACTCTTGTTCTATTTCTCATCATCCTTATTTTGAAACTTTGAATAATAATAATCAAGGAAATAATAATAACCCTTTTCTTTATCAAGCACAAAACATTCAAAATCTTAGACAATTTGATGAACAACATAGTAGTACAAGTACTATGATGTTGAATAATCATGAGCCTTTGTCTTTGTCACTTTCATCAAATAAAAGTGTTAGTAGTAGTAATTTACCTTTGGAGTTGAATCTACAAAGATATGGATCTATGATTTATAGTGGTGGAGGTGTGATTCAAGGGTTGGTTGAAGGAGGAGGAGGAAGTGGTGGTAATTCAGTTCCATTTACTGGATATGCTTCTGTTTTGAAGGATTCTAGGTTTTTGAAACCAGCTCAAGAATTGTTGGAAGAGATGTGTGATGTTGGAAATCTTGGTTTTTGTGGTGACAAAATTGTTGTTGTTGCTGATTCTTCTTTGATGATGGAATCTCCTTTGGAAAGATTGAGTGAAGAAGATCCATTTGGTGATGGTCGCAATAAATCAAGATTGTTGACTATGCTTGATGAGGTTTACAAGAGGTACAGGCAATACTACCAACAGATGCAATCGGTTGTAACATCATTTGAATATGTTTCCGGCCTTAACAATGCAGCTCCTTATGCAAGTTTGGCGATAAAAGCTATGTCCAAACATTTTAGATGCTTGAAGAAGGCAATTACCGATCAACTACAGTTCAACAATAAGGCTCATTTTTACACAAGCAACCGGAAGGAAGAATCTCCTAGATTTGTCAATAGTGAAAGAGGAGGACCTTACAGCCATAGGTCAGGTTATCTTGAGCAGCAACAACCTGTTTGGCGACCTCAAAGAGGACTCCCTGAGCGCGCTGTCACTGTTCTTAGAGCCTGGCTCTTTGAACACTTTCTGCATCCCTATCCTACTGACACAGACAAGATAATGTTGGCTAAACAAACCGGTCTGTCGCGTAGCCAAGTGTCTAATTGGTTCATAAATGCAAGAGTAAGGCTTTGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACAAGGCAAGCTCCAAAAGATTCACAACAAAAGGAAGAAAATTGTAGGAACAAATCAAGTGATCATCATTTGCCTTCAGATACTTCTCTAGTTTCCGAGAATCCATCTACCTCAACAGATAAGTTTCATGATGCCGCTTACAAGCGCGCCGTAAATGAAATTCCTAACATACCAATTAGGAGTCAAGGACAACAACATCATCTACAACAACAACACCGGCAACAACAACAAATGAGTCTACCTTTTCAACAAGTTGGTGTTGGAATGAACATTGGTAGTGGAAGCAATAATAATAATCATAGTAGTAATAATAGTAATGTGTCATTGACACTAGGACTTTATCAAAATCATGGGATTGGTTTAGCTGAACCATTTCCATTAAGTGCAGCTCAACGATTTGGTCTTGGTCTTGAAAACACTAATGAAGGTAATTATGTTATGAGTAGTTTTGAATCACAAAATAGGCATTTTGGAAGAGATGTTATTGGTGGGCAAATGTTTCATGACTTTGTAGGATGA 1842 0.3702 MASHEGFEGYHVPQQSRRDKLRVVVAQNQNQPHEPLLPFYDSSSFITNYNQQGLKPNSCSSSNSMKDLECSNLMMRFSREDQGKRVMNISSSNSCSISHHPYFETLNNNNQGNNNNPFLYQAQNIQNLRQFDEQHSSTSTMMLNNHEPLSLSLSSNKSVSSSNLPLELNLQRYGSMIYSGGGVIQGLVEGGGGSGGNSVPFTGYASVLKDSRFLKPAQELLEEMCDVGNLGFCGDKIVVVADSSLMMESPLERLSEEDPFGDGRNKSRLLTMLDEVYKRYRQYYQQMQSVVTSFEYVSGLNNAAPYASLAIKAMSKHFRCLKKAITDQLQFNNKAHFYTSNRKEESPRFVNSERGGPYSHRSGYLEQQQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKIMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAPKDSQQKEENCRNKSSDHHLPSDTSLVSENPSTSTDKFHDAAYKRAVNEIPNIPIRSQGQQHHLQQQHRQQQQMSLPFQQVGVGMNIGSGSNNNNHSSNNSNVSLTLGLYQNHGIGLAEPFPLSAAQRFGLGLENTNEGNYVMSSFESQNRHFGRDVIGGQMFHDFVG* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2530 613 MobiDBLite consensus disorder prediction 441 481 - -
Mal4g2530 613 SMART prehox3 202 327 IPR006563 -
Mal4g2530 613 MobiDBLite consensus disorder prediction 441 464 - -
Mal4g2530 613 MobiDBLite consensus disorder prediction 342 361 - -
Mal4g2530 613 Pfam Associated with HOX 207 326 IPR006563 -
Mal4g2530 613 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 25 587 - -
Mal4g2530 613 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 25 587 - -
Mal4g2530 613 MobiDBLite consensus disorder prediction 465 481 - -
Mal4g2530 613 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Mal4g2530 613 Gene3D - 375 437 - -
Mal4g2530 613 SUPERFAMILY Homeodomain-like 374 439 IPR009057 -
Mal4g2530 613 SMART HOX_1 372 436 IPR001356 GO:0003677
Mal4g2530 613 CDD homeodomain 372 433 IPR001356 GO:0003677
Mal4g2530 613 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2530 Mal-Chr4 67512296 67517599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2530 137 613 Homeobox Transcription Factor Family AT5G02030 47.628 6.58e-113 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal4g2530 POX 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2530 - - cam:101498314 847.81