Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2499 ATGGCACGGGACATTTCGTTCATGAATACTGCTGGACCTTCAGGTTACCAAGCCGTGGCATTAAGATCCGGTTCTGACCGCTCTGTATTCTACCGTTGTGAAATTTCTGTCTATCAAGACAGTTTGTATGCCTATAACATGCGTCAATTCTATAGAGAATGCAAAATCAGCGGCACTGTGGACTTTATCTTTGGATATGCCGCTGCTGTATTTCAAAACTGCACGATATTGGTCAAAAAAGGGCTGCCACGACAAAGTAATACCATCACGGCTCAAGGCGGAAGATACAGTATAAACCCATATGGTTTCTCATTTCAATTCTGCAACATTTCTGCAAATTATGATCTTTTGCCATTCCTAAATTCAACCTCAACATTTCTTGGAAGACCATGGAAACCGTATTCAACAACGATTTTCATGCAATCTTTCATTAGTAATATCTTGAGCCCAAAAGGATGGTTAGAGTGGAATCATTCTCAATATTTAGACACATTATACTATGCTGAGTATAAGAATTATGGACCAGGAGCTGGAACACAAAATAGAGTGAAATGGTTAAGGTACCATGTCCTACATGATCCCAAAGAGGCTATTAACTTTACAGTGGCCAAATTCATTATGGGGGATCTATGGTTACGTTCAACAGGTGTACCATACACTCCTGGGTTTGGGGATCTTGCCTAA 684 0.4035 MARDISFMNTAGPSGYQAVALRSGSDRSVFYRCEISVYQDSLYAYNMRQFYRECKISGTVDFIFGYAAAVFQNCTILVKKGLPRQSNTITAQGGRYSINPYGFSFQFCNISANYDLLPFLNSTSTFLGRPWKPYSTTIFMQSFISNILSPKGWLEWNHSQYLDTLYYAEYKNYGPGAGTQNRVKWLRYHVLHDPKEAINFTVAKFIMGDLWLRSTGVPYTPGFGDLA* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2499 227 ProSitePatterns Pectinesterase signature 2. 56 65 IPR033131 -
Mal4g2499 227 SUPERFAMILY Pectin lyase-like 1 222 IPR011050 -
Mal4g2499 227 PANTHER PECTINESTERASE 1 223 - -
Mal4g2499 227 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 1 223 - -
Mal4g2499 227 Pfam Pectinesterase 1 209 IPR000070 GO:0030599|GO:0042545
Mal4g2499 227 Gene3D - 1 223 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2499 Mal-Chr4 66416213 66416896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2499 1 223 Carbohydrate Esterase AT4G33220 60.538 9.66e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2499 K01051 - gmx:100798620 334.339