Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2487 ATGGCTGTGGAGAATCAAAGGGGAGCCATTGACCGTTTTCCTGTGGGTATGCGTGTTCTTGCCGTTGATGACAACCCAACTTGTCTCAAAGTCTTATCCAAACTTCTTTCTGAATGCAAATATCATGTTACTACAGCCACTAATGCATTTGATGCACTGAAAATGTTGAGGCAAAACAGAAAGAACTTTGACCTGGTTATTAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGCTGCTTGAGTTGGTAGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACGAGTATGGTGCTCAAGGGTGTTACCCATGGTGCTTGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTCAGAAACATATGGCAACATGTTGTTCGAAAGAAAAAAACTGATTCCAAGGATGAGAATCAGGTCCCTAATATTTCTGGGGGAAACAATCAAAACATATTGGAGAACAGTGCTGATCAGAACAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAAGAGGAAGAAGAAGAAGAAGATGAAGGGACTGGAGATGGAGATGGAGATGAGAATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTGCTGAACTGCATAAGAAATTTCTTGATGCTGTCAGTCAACTTGGCCCAGACAAGGCTGTTCCGAAGAAAATACTTGAACTGATGAATGTTGAAGGGATTACCAGAGAAAATGTGGCAAGCCATCTGCAGAAATTTAGACTCTATTTGAAAAAGGTAAGTCCCCATCATGATAACATGGTTGCTCCACTGGGTGGTGGTAATGATTCTTACCTTCGGATGAGTGGAATAGATGGATATGCAGATTTTTCCACCTCAACTGGATCTGGAAGGATCTCAAGCACCACATCGCCATCATATGCATCAAGCGGAGTTTTAGGTAGGCTGAATTCTCCAGCCGGCTTGAACATGATAGGAATTAATTCTTCAACACTGATTCCGCCTGTTCAGTCTCAAAACATCATCAGCTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCGTTCCAACCGAGCTTAACCAATCTAACCTAAACAATAGGGCAGCTGGATTATCGCAGTTAACTCAAATAGATTCCACTGGATTTGCAGTTGCGTCTGGCTTCCACGATAGTAGGGCTGTTAACAGTTCTAATCAAGTCTCAAACCATCATTTATTGTTGCAAGGAAATTCACAACAGTCACACAATGCAGGGTCATTCAGCAATCTGTCTTCTGTTGGATCTACTTCTTTGGGAAACAAGAACATTGATATTTGCGGTTCTTCTAATTTGTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTAAATTTCCTGCTAGTGCTCTGCCGGTATGCAAGTCTTTCAATAACAACCAACTGCCTCTCACTAGCATTACTGCTTTTAACCCAAGCTCTCGTATCGCTAACAGTCCAGTTGCTTTGGAGGAAGCCAGAAATATGCCGAGCTGCCAAGAATATGGCTTAATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAGCTGCGCTAACAGTCCAGTTGCTTTAGAGGAAGCAAGAAATGTGCCGAGATGCCAAGAAGATGGCTTAATTGGGAACTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAGCTGCGCTAACAGTCCAGTTGCTTTAGAGGAAGCCAGAAATGTGGCGAGATGCCAAGAAGATGGCTATATTGGGAATTTTACACAGCCTTCGAGTTATGCTCTGCGACAAAGCTGGGAAGAACTTAAACCGGATTACAGCCACAACACGAGTCCTCCCTTCAATCATGGGAACTCTCAGGTTTGTTCCAGCAGGGCAGTGACAAATTCTGCATCCCACAATATCAACCAAAGTAAAACAGTTTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCATGTATATGGCGCTTCCACGTCAGTTGCCCGGTGCACCGACGTTGATCAATTCTCATCAGACGTACGACTCAACTCGAATGATGCCTACAGGTTGGAGAAGCTGAGGTCCCAAGTTGGATATATTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATGGTCAAAAGGGAGCAAATTGAGATGACATTGATGGATGGAGAAATGGGCTATGATGCTTACCCAGTTGGATCATGTATATGA 2226 0.4335 MAVENQRGAIDRFPVGMRVLAVDDNPTCLKVLSKLLSECKYHVTTATNAFDALKMLRQNRKNFDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVLKGVTHGACDYLVKPVRLEELRNIWQHVVRKKKTDSKDENQVPNISGGNNQNILENSADQNKRLGKRRKEQDEEEEEEEDEGTGDGDGDENDPSSQKKPRVVWSAELHKKFLDAVSQLGPDKAVPKKILELMNVEGITRENVASHLQKFRLYLKKVSPHHDNMVAPLGGGNDSYLRMSGIDGYADFSTSTGSGRISSTTSPSYASSGVLGRLNSPAGLNMIGINSSTLIPPVQSQNIISSWIPANQSSSLLHGVPTELNQSNLNNRAAGLSQLTQIDSTGFAVASGFHDSRAVNSSNQVSNHHLLLQGNSQQSHNAGSFSNLSSVGSTSLGNKNIDICGSSNLLDYNRCSENWQSQAQLPKFPASALPVCKSFNNNQLPLTSITAFNPSSRIANSPVALEEARNMPSCQEYGLIGNFIQPSSYAPRQSCANSPVALEEARNVPRCQEDGLIGNFIQPSSYAPRQSCANSPVALEEARNVARCQEDGYIGNFTQPSSYALRQSWEELKPDYSHNTSPPFNHGNSQVCSSRAVTNSASHNINQSKTVCSNRVDASFVDHVYGASTSVARCTDVDQFSSDVRLNSNDAYRLEKLRSQVGYIEGFGTLEDIMGAMVKREQIEMTLMDGEMGYDAYPVGSCI* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2487 741 CDD REC_typeB_ARR-like 19 133 - -
Mal4g2487 741 Gene3D - 17 199 - -
Mal4g2487 741 PANTHER TWO-COMPONENT RESPONSE REGULATOR 569 722 - -
Mal4g2487 741 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 525 - -
Mal4g2487 741 SUPERFAMILY CheY-like 16 146 IPR011006 -
Mal4g2487 741 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 258 IPR017930 -
Mal4g2487 741 Gene3D - 200 261 - -
Mal4g2487 741 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Mal4g2487 741 Coils Coil 158 185 - -
Mal4g2487 741 MobiDBLite consensus disorder prediction 144 163 - -
Mal4g2487 741 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Mal4g2487 741 SMART REC_2 17 129 IPR001789 GO:0000160
Mal4g2487 741 MobiDBLite consensus disorder prediction 177 192 - -
Mal4g2487 741 PANTHER TWO-COMPONENT RESPONSE REGULATOR 569 722 IPR045279 GO:0009736
Mal4g2487 741 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 525 IPR045279 GO:0009736
Mal4g2487 741 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 202 255 IPR006447 GO:0003677
Mal4g2487 741 MobiDBLite consensus disorder prediction 133 205 - -
Mal4g2487 741 SUPERFAMILY Homeodomain-like 200 259 IPR009057 -
Mal4g2487 741 Pfam Myb-like DNA-binding domain 204 252 IPR001005 -
Mal4g2487 741 PIRSF RR_ARR_type-B 1 740 IPR017053 GO:0003677|GO:0003700|GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2487 Mal-Chr4 65953276 65957352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2487 1 389 Response Regulator Gene Family AT2G25180 48.379 5.85e-109 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal4g2487 Response_reg 3.8e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2487 K14491 - gmx:100807822 773.467