Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2483 ATGGATGGTAGACCACAGGTTGCGAGCCCATCGTTAGTGAATGGAGTTTTGAGATTTTCCACTGATTTAAGAAATGAAAGTGGTGTTGATAACAACATAAATAGGGGACAGTTCAATGGATATGTTGCTGGAAGTTCAAATGCAGATCAATGTTCGCAGGATGAATCTATTGAAGATACACATGGTTTTTCTAATGGAAGTGACGATTCTGAAGTCAATCCCATTGTTATAAAAGATATGGTTGATATAGTGAAGATTGATTTTGAAAATATGTCTACAGGTGATGTGGAAAGATATGAATTTGTTGGGTTAGAGGTGGCCTACATGTTCTACACTTGGTTTGCTAGGATGTCTGGGTTTTCTGTTCGTAAGGGGCAAGTGGTGAGGGGTCGCAATGGTGAAGTTGTTCAGCAAACCTTTGTTTGTTCTTGTCAAGGATACAGAGAGGATAGGGGACTAACCATGGAAACCCGAAAGCGCGAGCCAAAAAATGAAACAAGATGTGGCTGCAATGCAAAATTTCTTTGTTCAAATTAA 537 0.3948 MDGRPQVASPSLVNGVLRFSTDLRNESGVDNNINRGQFNGYVAGSSNADQCSQDESIEDTHGFSNGSDDSEVNPIVIKDMVDIVKIDFENMSTGDVERYEFVGLEVAYMFYTWFARMSGFSVRKGQVVRGRNGEVVQQTFVCSCQGYREDRGLTMETRKREPKNETRCGCNAKFLCSN* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2483 178 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 51 174 - -
Mal4g2483 178 Pfam FAR1 DNA-binding domain 110 174 IPR004330 -
Mal4g2483 178 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 51 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2483 Mal-Chr4 65842346 65842973 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g2483 FAR1 5.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2483 - - mtr:MTR_6g463250 168.318