Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2478 ATGGAGATTTTCAAATTCTTCTACTTCATTAATCTCCTCTCTACTTTCATCTTATCATCATCATCATCTTTACCAATTGATCCTTATTCACAAGCACTCCTAAGTTTAAAATCTGAGCTTATAGTTGATGATAATAGCTTGCATGACTGGGTGGTGCCCTCTGGAGGGAACTTAACTGAAAGTGGAAGTTCATATGCATGTTCTTGGTCTGGCATCAAGTGTAACAAGGACTCAATTGTAACTTCCATAGACCTTTCCATGAAGAAATTAGGTGGTGTACTATCAGGTAACCAATTCAGTGTGTTCACAAAGGTTACTGATTTCAACCTTAGCTATAATTTCTTCTCTGGGAAACTTCCACCAGAAATTTTCAACCTCACAAGCTTGAAAATCTTAGATATAAGCAGAAACAATTTTTCAGGTCAATTCCCAAAAGGAATTCCTAAACTAAAAAATTTGGTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGTCAACTACCTGCTGAATTTTCAGAATTGGAAAATCTTAAGATTCTTAACCTAGCTGGAAGTTACTTCAGAGGAACCATTCCATCTGAATATGGTTCTTTCAAAAGCCTTGAGTTTCTTCATCTTGCTGGAAATTCTCTATCCGGAAGTATACCACCAGAAATTGGTAACCTTGATACAGTGACTCACATGGAGATTGGCTACAATTTTTATCAGGGTTTCATTCCACCTCAACTAGGTAAAATGAGCCATCTTCAGTATCTTGACATAGCAGGTGCTAATCTATCTGGTTCTATTCCAAAGGAACTTTCCAATCTCACAAATTTGCATTCAATTTTTCTATTCAGAAACCAGCTCACAGGATCAATACCAAGTGAGTTCAGCAAAATTAAACCTCTCATAGATTTAGATCTCTCTGATAATTTCCTTTCAGGGTCAATTCCTGAAAGCTTTTCAGAGCTGAAAAATTTAAGACTTCTTAGTCTCATGTACAATGACATGAGTGGAACTGTTCCAGATGGCATTGCAGAACTCACATCCTTGGAAACTCTTCTCATTTGGAACAATAACTTCTCTGGATCACTCCCAAAGAGTTTAGGAAAAAAATCCAAACTCAAGTGGGTGGATGTCTCCACAAACAACTTCAATGGCAGCATACCACCAGATATCTGTCTTGGTGGAGTACTGTTTAAGCTAATCCTGTTTTCAAACAAATTCACAGGTAGTCTTTTCTCGATCTCGAATTGTTCTTCCCTTGTTCGACTTCGCCTTGAAGATAATTCATTCTCAGGTGAGATTCCTTTAAAATTCAGACATCTTCCTGATATCACCTATGTTGATTTGTCATGGAACAATTTTGTTGGTGGGATTCCCTTAGATATTTCTCAATCTACTCAATTGGAGTATTTCAATGTCTCTTACAATATGCAATTAGGAGGAAACATACCTTCACAAATTTGGTCTTTGCCACAACTTCAAAATTTCTCAGCATCTTCTTGTGGTATTTTAGGCAATCTTCCTTCATTTGAGTCCTGCAAATCAATTTCAACAATTGATCTTGGTAGAAACAACTTATCTGGAACAATCCCAAAAAGTGTTTCGAAATGTCAAACTCTTGTGACAATCGAATTATCTGACAATAATTTGACAGGTCAAATACCTGAGGAGCTTGCAAGTATCCCTATTCTTGAAACTGTAGATTTATCTAAAAATAAGTTCAATGGCTTCATACCTGAAAAGTTTGGTAGTTCATCAAGTTTACAACTTCTCAACGTGTCTTTCAACAATATCTCAGGTTCAATACCAAAAGGAAAGTCATTCAAATTAATGGATAGTAGTGCATTTGCTGGAAATTCAGAGCTATGTGGAGCACCATTAAGACCATGTTTTAAGTCAGTAGGAATATTAGGCAGCAAAGGGACTTGGAAGCTTACACATATTGTGTTACTCTCGGTAGGGTTGCTAATAATCCTTCTGGTATTGGGTTTTGGAACACATCATTTCAGAAAGGGATATAAGAGTCAATGGAAAATAGTTTCATTTGTTGGACTTCCACAATTTACACCAAACGATGTCTTGACAAGCTTCAGTGTTGTTGCTACTGAACACACACAAGTTCCATCACCATCATCAGTAATTACAAAAGCAGTTCTTCCTACAGGTATAACAGTTTTAGTCAAGAAGATTGAATGGGAAACAAGGAGAATTAAGTTGGTGTCAGAATTTATAATGAGGCTAGGAAATGCAAGGCACAAGAATTTAATCAGATTGTTGGGTTTTTGCCACAATCAGCAACTAGTTTACCTTTTGCATGATTACTTGCCAAATGGAAATTTGGCTGAGAAAATTGGAATGAAATGGGATTGGTCAGCTAAATTCAGAACAGTAGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTTCCCAGCTATACCACATGGAGACTTGAAGTCCACCAACATTGTATTTGATGAAAATATGGAACCCCATTTGGCTGAATTTGGGTTCAAACATGTCATACAGTTGAGCAAAGGCTCATCTCCAACTACAATTAAGCAGGAAACAGAATACAATGAAGCAATTAAAGAGGAACTCAGGAATGATGTCTACAATTTTGGGAAGATGGTTCTAGAAATTTTAACTGGCGAAAGGTTGACAAGTGCAGCAGCCAGCATTGACAACAAATCACGGGAGGTTCTACTACGAGAAGTTTGCAATGGTAATGAAGTGGCTTCTGCTAGTACAATCCAAGAGATTAAACTGGTTCTTGAGGTTTCTATGCTTTGCACTAAAAGCAGATCATCCGATCGCCCATCCATGGAAGATGCTCTGAAGTTTTTGTCAGGGTTAAAGCGTTCAGAAGATGACAAAATTTCTAAATAG 2883 0.3732 MEIFKFFYFINLLSTFILSSSSSLPIDPYSQALLSLKSELIVDDNSLHDWVVPSGGNLTESGSSYACSWSGIKCNKDSIVTSIDLSMKKLGGVLSGNQFSVFTKVTDFNLSYNFFSGKLPPEIFNLTSLKILDISRNNFSGQFPKGIPKLKNLVVLDAFSNSFSGQLPAEFSELENLKILNLAGSYFRGTIPSEYGSFKSLEFLHLAGNSLSGSIPPEIGNLDTVTHMEIGYNFYQGFIPPQLGKMSHLQYLDIAGANLSGSIPKELSNLTNLHSIFLFRNQLTGSIPSEFSKIKPLIDLDLSDNFLSGSIPESFSELKNLRLLSLMYNDMSGTVPDGIAELTSLETLLIWNNNFSGSLPKSLGKKSKLKWVDVSTNNFNGSIPPDICLGGVLFKLILFSNKFTGSLFSISNCSSLVRLRLEDNSFSGEIPLKFRHLPDITYVDLSWNNFVGGIPLDISQSTQLEYFNVSYNMQLGGNIPSQIWSLPQLQNFSASSCGILGNLPSFESCKSISTIDLGRNNLSGTIPKSVSKCQTLVTIELSDNNLTGQIPEELASIPILETVDLSKNKFNGFIPEKFGSSSSLQLLNVSFNNISGSIPKGKSFKLMDSSAFAGNSELCGAPLRPCFKSVGILGSKGTWKLTHIVLLSVGLLIILLVLGFGTHHFRKGYKSQWKIVSFVGLPQFTPNDVLTSFSVVATEHTQVPSPSSVITKAVLPTGITVLVKKIEWETRRIKLVSEFIMRLGNARHKNLIRLLGFCHNQQLVYLLHDYLPNGNLAEKIGMKWDWSAKFRTVVGIARGLCFLHHECFPAIPHGDLKSTNIVFDENMEPHLAEFGFKHVIQLSKGSSPTTIKQETEYNEAIKEELRNDVYNFGKMVLEILTGERLTSAAASIDNKSREVLLREVCNGNEVASASTIQEIKLVLEVSMLCTKSRSSDRPSMEDALKFLSGLKRSEDDKISK* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2478 960 Gene3D Ribonuclease Inhibitor 338 392 IPR032675 -
Mal4g2478 960 Gene3D Ribonuclease Inhibitor 283 337 IPR032675 -
Mal4g2478 960 Gene3D Ribonuclease Inhibitor 393 630 IPR032675 -
Mal4g2478 960 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Mal4g2478 960 SUPERFAMILY Protein kinase-like (PK-like) 708 950 IPR011009 -
Mal4g2478 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Mal4g2478 960 ProSiteProfiles Protein kinase domain profile. 673 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2478 960 Pfam Leucine rich repeat 272 330 IPR001611 GO:0005515
Mal4g2478 960 SMART serkin_6 684 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2478 960 Pfam Protein kinase domain 712 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2478 960 Gene3D Ribonuclease Inhibitor 191 282 IPR032675 -
Mal4g2478 960 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 953 - -
Mal4g2478 960 Gene3D Transferase(Phosphotransferase) domain 1 707 956 - -
Mal4g2478 960 PANTHER UNNAMED PRODUCT 5 953 - -
Mal4g2478 960 SUPERFAMILY RNI-like 82 404 - -
Mal4g2478 960 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
Mal4g2478 960 SUPERFAMILY L domain-like 371 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2478 Mal-Chr4 65777864 65781234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2478 7 948 Receptor kinase-like Gene Family AT5G51350 51.875 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal4g2478 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2478 - - aprc:113852384 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2478 4 65777864 65781234 Mal4g2478 4 65777864 65781234 ECH