Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2462 ATGGCAGGAATGCTTCCAGGAGTTGAATCTGCTAGAAGGAGACGTGTCCATAAGTGTGGAGGATTTTATGATTCACCATCTTTGGCTTCTCATAACACTTCAAGACGCTCTTCTTTCTGTTTGTATACAAGTAACCATGAACCTCGTATTTCCTCATCCTCTTCAATGCAAAGAAATATGTCATACCAGTCACACCAAGATGAAAATATGGTAGGAGCAGCTAGAGAAGCCAAACAAAGATTGGATGACAAATTCAGATCACAAAGGGTATCAGAAAACATAAGGAAAAAGAGCATGAAGTGTGTAGAAGGTAGAAAAGAAAGCATAGAAGAGTTACAAACTGAGGTTTATGGGACAAAGAAAATTGGTCCAAGGAAGTTCAGTTGGAGCAAATTGAGCTGGAAAGCATCAGAACAAGAGGATTGTGCTGTGTGTTTGGAATCATTTAAGATTGGAGACAAATTGATTCCTCTACCTTGTGCACACAAGTTCCATTCCACATGCTTGAAGCCTTGGTTAGAAAATAATTCACACTGTCCATGTTGTAGAACTACCATTCTTTCCCTTTAG 570 0.393 MAGMLPGVESARRRRVHKCGGFYDSPSLASHNTSRRSSFCLYTSNHEPRISSSSSMQRNMSYQSHQDENMVGAAREAKQRLDDKFRSQRVSENIRKKSMKCVEGRKESIEELQTEVYGTKKIGPRKFSWSKLSWKASEQEDCAVCLESFKIGDKLIPLPCAHKFHSTCLKPWLENNSHCPCCRTTILSL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2462 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 188 IPR013083 -
Mal4g2462 189 ProSiteProfiles Zinc finger RING-type profile. 142 183 IPR001841 -
Mal4g2462 189 SUPERFAMILY RING/U-box 131 187 - -
Mal4g2462 189 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 185 - -
Mal4g2462 189 SMART ring_2 142 182 IPR001841 -
Mal4g2462 189 Pfam Ring finger domain 141 183 IPR001841 -
Mal4g2462 189 CDD RING-H2_PA-TM-RING 141 183 - -
Mal4g2462 189 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2462 Mal-Chr4 64890113 64890977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2462 1 86 C3H Transcription Factor Family AT2G15580 49.474 4.87e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2462 - - gmx:100527583 283.878