Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2449 ATGGAGTTGAAAAAGGCGGCCAAGCTTGTGAGGTTCTACGATGATGATGGGAAAAAGGCAAAATCATCATGTTCAAAATACAAGGTATTCCCAGAGGACCATGAGCTGTGGAGTAAAAGAATACTTGACCCGGGTAGCGAAATTGTGTTAAAATGGAATCGCGTCTTTATAGTTTCTTGTTTGCTGGCTCTTTTTGTTGATCCCTTGTACTTTTATTTGCCTACTGTGAGTGTGGTAGAGAACTCCTCCTCCTCCTCCTCCTGTGTCAGGACTGACTTAACATTACGGATTCTTGTCACCTTTCTTCGCACTATTGCCGATGTCTTTTATCTGTTGCACCTCATCATTAAGTTCAGAACAGCATATGTGGCACCCAGCTCACGGGTATTTGGAAGGGGTGAACTTGTCATGGACCCTACTCGAATTGCTAGGAGATATATCAGATCTGACTTCTTCATTGATTTTATTGCCACATTACCACTACCACAGATGGTCATCTGGTTTATCATACCGGCTACAAGGAGCCCTCAGACTGATCACAAGAATAATGCTCTTGCATTAATTGTCTTGCTCCAATATGTTCCAAGATTATATTTGATTTTTCCATTAAGTTCTCAAATAATCAAAGCAACCGGAGTGGTTACAAAGACTGCTTGGGCAGGAGCAGCGTATAATTTGCTGTTGTACATGTTGGCTAGCCATGTTTTAGGGGCATCCTGGTATCTCCTGTCTGTTGACCGATATACTACTTGCTGGAAATCCCTATGTAAAAAGGAACGTAGCCCTCACAATTGCTTTCTCTACCTAGACTGCAGTTCTTTGAATAATGATATGCGCAAGATATGGGCAAATAGTACAGATGTGTTTAACAGTTGTGACCCCAGTAACGACATTCAGTTCAAGTATGGGTTATTCCAAAATGCATTAACAAAGCACGTTGTCTCTTCAAACTTCATACCAAAATACTTATATTGTTTATGGTGGGGGCTGCAGCAATTAAGTTCTTACGGCCAAAACCTAGAAACGACCACATTTATTGGTGAAACGTCATTTGCTATTGTGATTGCCATCTTGGGACTTGTATTATTTGCTCATTTGATTGGGAACATGCAGACATATTTACAATCAATTACTAAAAGGCTTGAGGAATGGAGGCTAAAGCGAAGAGACACAGAGGAGTGGATGGGGCATCGCCAACTCCCTGAAGATTTGAGATTTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCAACTCGTGGTGTTGATGAAGAAACCATTCTACGTTCATTGCCAACTGATCTTCGTCGTGATATCCAACGCCACCTATGCTTAGACCTTGTTAGACGAGTTCCCTTCTTCTCACAAATGGATGATCAACTTCTTGATGCGATATGTGAGCGACTGGTATCTTCTCTTAGCACTCTAGGCACCTACATTGTTCGGGAGGGTGATCCTGTAACTGAAATGTTGTTTATCATTAGAGGCAGACTAGATAGTTCTACGACAAATGGTGGCCGGACTGGTTTCTTCAACTCAATCATATTGAGACCTGGAGATTTTTGTGGCGAGGAACTACTTTCTTGGGCACTACTCCCAAAATCAACCATGAATTTGCCGTCTTCAACTAGGACAGTTAAAGCCCTAAGTGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGACCTAAAGTTTGTCGCTAATCAATTTAGGCGCCTCCACAGCAAAAAGCTGCAGCACACCTTTCGATTTTACTCTCACCATTGGAGGACTTGGGCCGCTTGTTTTATACAGGCTGCTTGGCGTCGATATAAGAAAAGGATGTCTGCAAAAGATCTTGGTTTGAGGGAATCCCTTCCTGTAGATGAGACAGTAGCCAGTGAGAGAGAACATGAAGAGGAATATCCTACTGGTTCAAACTCATCTCTGGCTAAATTGAACCTTGGGGTCACAATTCTTGCTTCAAGGTTCGCTGCTAACACACGAAAAGGTGCACTAAAGATGAAAGATGACTTGCCTAAGCTACGAAAGCCTGAAGAACCTGACTTCTCTACCGAAGCAGATGATGATTAG 2070 0.4237 MELKKAAKLVRFYDDDGKKAKSSCSKYKVFPEDHELWSKRILDPGSEIVLKWNRVFIVSCLLALFVDPLYFYLPTVSVVENSSSSSSCVRTDLTLRILVTFLRTIADVFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPTRIARRYIRSDFFIDFIATLPLPQMVIWFIIPATRSPQTDHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSVDRYTTCWKSLCKKERSPHNCFLYLDCSSLNNDMRKIWANSTDVFNSCDPSNDIQFKYGLFQNALTKHVVSSNFIPKYLYCLWWGLQQLSSYGQNLETTTFIGETSFAIVIAILGLVLFAHLIGNMQTYLQSITKRLEEWRLKRRDTEEWMGHRQLPEDLRFRVRRFVQYKWLATRGVDEETILRSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTLGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTMNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSAKDLGLRESLPVDETVASEREHEEEYPTGSNSSLAKLNLGVTILASRFAANTRKGALKMKDDLPKLRKPEEPDFSTEADDD* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2449 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 686 - -
Mal4g2449 689 Pfam Cyclic nucleotide-binding domain 477 564 IPR000595 -
Mal4g2449 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 16 686 - -
Mal4g2449 689 Gene3D Jelly Rolls 451 571 IPR014710 -
Mal4g2449 689 ProSiteProfiles cAMP/cGMP binding motif profile. 453 583 IPR000595 -
Mal4g2449 689 SUPERFAMILY Voltage-gated potassium channels 46 375 - -
Mal4g2449 689 SUPERFAMILY cAMP-binding domain-like 382 575 IPR018490 -
Mal4g2449 689 Gene3D Helix hairpin bin 380 444 - -
Mal4g2449 689 MobiDBLite consensus disorder prediction 667 689 - -
Mal4g2449 689 Pfam Ion transport protein 52 380 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal4g2449 689 MobiDBLite consensus disorder prediction 667 682 - -
Mal4g2449 689 PRINTS EAG/ELK/ERG potassium channel family signature 348 359 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g2449 689 PRINTS EAG/ELK/ERG potassium channel family signature 366 375 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g2449 689 PRINTS EAG/ELK/ERG potassium channel family signature 231 241 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g2449 689 PRINTS EAG/ELK/ERG potassium channel family signature 322 339 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g2449 689 PRINTS EAG/ELK/ERG potassium channel family signature 416 423 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g2449 689 PRINTS EAG/ELK/ERG potassium channel family signature 114 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal4g2449 689 Gene3D - 55 378 - -
Mal4g2449 689 CDD CAP_ED 453 584 IPR000595 -
Mal4g2449 689 SMART cnmp_10 453 584 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2449 Mal-Chr4 63695119 63700965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2449 37 688 Ion Channels AT4G30360 74.355 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2449 K05391 - gmx:100808425 1202.58