Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2437 ATGCCAGACATTGTGAACCTTTCTCCCCCTCTCGCACCTTGCTCCAACACCATCAAGCTCACCAATGCTGCCGATTCACCTACGCTCGAACCACTCCCCAATGCTGTTGCTTCTTCCGATGATGGCAGTGTTCATGCTCGGGTTTTGAAGAGGTCTCGCAGTTCTCTCCGGAAGACAGATAATCACAAGTCTTTCTGGGATCGCCTTACAAATCCTCAATCTCTTCCTTTTCTCGTCGGCGCTCCAAAGATGGTTGAATGTTGTTTCTGCCGCCATGCTGTGTGTCCCGGGGACGACCTGCTATGTTCTATTCGTGGATGTGGCACACGCTATCATAAGGAATGTGCAAAACAAGCTGCTGGGGTTTCAAATCTCAACAAGTTCAAGTGTCCACAACATGTGTGCTTCATTTGCAAGCAAAAGCCGCATTTGCGGTGTGTGCGTTGCCCGGCAGCTTTCCATAGTAAATGTGCACCATGGCCAGAAGCAGTGATCTCTCTGAAAGATCATCCCGGGCAAGCTGTTTGTTGGAGACATCCTTCTGATTGGCGCCTGGATAGAAAGGAGCAGCCTGATACTTCAACAAGTGACATTTCGGAAGTATTTTGTCGTTTGCCTCTTCCTTTTACTACCGAGGAATTCAAGATTGACTTCACTTGGAAAGACATGGACAATAAGATGGAGCCACCGCCATACACACACATAAGGCGCAATATATACCTAGTGAAGAAAAAGCGTAGTGATGTAGATGATGATGTTGGGTGCACCAACTGCAGTTCTACGTGCTCTGATGATTGTGTATGCAGGGTTCAATGCATAAGCTGCTCAAAGGCTTGTCGGTGCTCTGGAAATTGTAGTAATCGGCCATTTCGCAAGGAGAAAAAAATCAGGATTGTCAAGACTGAGTTTTGTGGATGGGGAGTTGAAGCTGCTGAAACAATTAAGAAAGGAGGGTTTATAATTGAGTATGTTGGAGAAGTCATTGATGATGCTTTATGTGAAGAAAGGCTTTGGGACATGAAATATAAGGGTGTGCAGAATTTTTACATGTGTGAGATTCGAAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATTCATCACGCTTTTTAAATCATAGCTGTGATCCCAATTGTGTTTTGGAGAAGTGGCAAGTAGATGGTGAAACACGCGTTGGTGTATTTGCTGCTCGTTCAATAGAAATTGGAGAGCCATTAACATACGATTACAGATTTGTGCAATTTGGTCCAGAGGTGAAGTGCCTCTGCGGTGCCTCGAAATGTCAAGGATTTCTAGGTTCAAAAAAGAAAATTAGCAAAGTAGACCTCTGTAAAATTAGCAAAGTAGACCTCTGTTGGGGCGCAAAACGTAAGCGAACTTTTGCACGACGACGACGACGGTAA 1404 0.448 MPDIVNLSPPLAPCSNTIKLTNAADSPTLEPLPNAVASSDDGSVHARVLKRSRSSLRKTDNHKSFWDRLTNPQSLPFLVGAPKMVECCFCRHAVCPGDDLLCSIRGCGTRYHKECAKQAAGVSNLNKFKCPQHVCFICKQKPHLRCVRCPAAFHSKCAPWPEAVISLKDHPGQAVCWRHPSDWRLDRKEQPDTSTSDISEVFCRLPLPFTTEEFKIDFTWKDMDNKMEPPPYTHIRRNIYLVKKKRSDVDDDVGCTNCSSTCSDDCVCRVQCISCSKACRCSGNCSNRPFRKEKKIRIVKTEFCGWGVEAAETIKKGGFIIEYVGEVIDDALCEERLWDMKYKGVQNFYMCEIRKDFTIDATFKGNSSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEIGEPLTYDYRFVQFGPEVKCLCGASKCQGFLGSKKKISKVDLCKISKVDLCWGAKRKRTFARRRRR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2437 467 Pfam SET domain 305 410 IPR001214 GO:0005515
Mal4g2437 467 PANTHER SET DOMAIN PROTEINS 73 461 - -
Mal4g2437 467 CDD SET_ASHR3-like 295 433 - -
Mal4g2437 467 SMART set_7 294 417 IPR001214 GO:0005515
Mal4g2437 467 ProSiteProfiles SET domain profile. 294 411 IPR001214 GO:0005515
Mal4g2437 467 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 73 461 - -
Mal4g2437 467 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 467 IPR025787 -
Mal4g2437 467 ProSiteProfiles Post-SET domain profile. 417 433 IPR003616 -
Mal4g2437 467 SUPERFAMILY SET domain 203 423 IPR046341 -
Mal4g2437 467 ProSiteProfiles AWS domain profile. 251 294 IPR006560 GO:0005634|GO:0018024
Mal4g2437 467 SMART PostSET_3 417 433 IPR003616 -
Mal4g2437 467 Gene3D SET domain 210 448 IPR046341 -
Mal4g2437 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 182 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2437 Mal-Chr4 62984838 62995835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2437 275 432 C2H2 Transcription Factor Family AT2G23740 35.196 2.13e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g2437 SET 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2437 - - aprc:113859744 707.983