Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2420 ATGAACGAATCCTCAACTCCATTAGCTGAAGATGTAGGGAATTTGGTGGACAATATCCAAAAAGATATTGTCGAACATGGGGAAGAGAGTGATGTTAGTTATATACCACAGTTAGAAATGGAATTTGAATCAGAGATAGCAGCATATGATTTTTATAACGAGTACAGCAAGAAAGTCGGGTTTGGTATTCGTCGGGAATATGGAAATAAAAGCAAAAAAGATGGAATTCTTACTTCAAGAAGATTTGTATGCTTCAAAGAGGGTAATCGAGGTGTTGACAAGCGAGATTACTTGACTAAAGAGCCTAGAGCAGAAACAAGAACAGGGTGTAAGGCACGTATGTGTATTTCACTTGATCGGAAGATTGGAAAATACAAGGTGGTTGACTTTGTTCCTCAGCATAATCACGGTCTTCAACCGCAAGAGTTTGTTCACATGATTCGCTCTCATCGACGCATATACGAGTCCCAAGCATTTCAAATTGTGTTGGCTGATGAATCTGGACTAAAACCAAAAGATTTCCATGAATATGCGTCTAAGCAAGTTGGTGGAAAAGAAAGTATTGGATATACAATACAAGACCATAAGAATTTCCTTCGAACCAAAATAATGCAATCACTAAGGTATGATGAAGTGGGTGCATTGTTGATGCATTTCAAAAAACAAAGTGAAAATCCTTCATTCTTTTACGAATTTCAAATGGACGTTGAAGAGCAAATAACAAACATATTTTGGGCAGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTGGTCACTTTTGACACCACATATAAGACAAATAAGGATTATCGACCACTTGGAGTATTTGTTGGTCTTAATAATCACAGACAAACTGTTGTTTTTGGGGCAACATTGCTATATGATGAAACAATTCCTTCATTTCGATGGTTATTTGAAACATTTCTCAAAGCAATGAATGCTGCAATGGCTAAGGCTATTTCTTTAACTATGCCAGAAACATTTCATGCATTATGCACTTGGCATATAAGAGAAAATGCTCTAAGACATGTAAATCATTTGTATCAGAGGAGTCATAAATTCTGCTCAGATTTTGAAGCATGCATCGATTTACATGAAGAGGAAAGTGAGTTTTTGAGCGCATGGGATGGTTTGCTTGTTGAGCATAATGTTCCTCATGATTCTTGGCTGCATACAATTTTTCGAGTGAAGGAAAAATGGGCATGGGCTTTTGTTCGAAAAACTTTCACTGCTGGTATGAGATCTACTCAATTAAGTGAAAGCTTTAATGCTGATTTGAAAAATCATTTGAAGTCTGATTTAAATATAGTGCAATTTTTCACTCACTTTGAAAGGGTTGTTAATGGAAAGAGAAGCAATGAGTCTCAAGCTGATTTTGAGTCAAGACATAAATTGCTTAGGTTGAAAATGAAGAAGGCTCCTATGCTTGTACAGGCTGCAAATGTTTACACACCTAAATTATTTGAGGAATTCCAAGAGGAATATGAGGAATACCAAGGCACTTGCATTCAGGTATTGAAAGAAGGGTTTTATATTGTCACAAATTATGATAATAGTAAAGAGCGGAAAGTTACAGGGAGTCTCGTGGATCAAAAGGTTTCTTGTGATTGTCGTAAGTTTGAGACACATGGTATCTTATGCAGTCATGCTTTAAAAGTTTTGGATGCAATGAATGTCAAGCAAATTCCTGAGCATTATATACTAAAGCGATGGACAAGAGATGCGAGGTTGGGAAGTAATCAAGATTGGAAAGGACAACATATAGATTTAGACATAAAAGCTCATTTCATGAAGCGATACAATGAGCTATGTCCTGGAATGGTTAAATTGACAAATAGAGCATCTGAAAGTCATGAAACCTACTCATTTTTGTCTAAAGTTTATGAAGAGTCCAGCAAAATAGTTGAGAATATGTTGGCGAAGAATTCCATGGATGAAGTGTCTATTGGAAAGCGTATTGTGTCCATATCAATTTCAGCTGGAGAAGTCGAAAGCAATTTGAACACTATTGATGTTGGTGGAGCAAAAGGCGTAAAGAAGCGAGATTGTTCATATAAGGCTAAAAGACGACCCCTTTCTTGGGTTGAAAAATTGGAAAAAATGAGAAAGACAAACCAACATGGGACTACAAATCAACATGGCACTGAAAGCTTACATGGGACTGCAAAAAAGAGAAAGGCAAACCAATCAAAGACTAAGAAAAAGTCTAAAATAACAATGGAACCATTGGCTTTGGACTGCAATTCAATATCTCTATCTCAAGAGCATCTAATTGGGATTACAAGTCAGCATGGGACTACAAATCAACATGGCAATGCAAGTCTACAATTGAATTTAAGTGAATATGTAGATGGAAGTCAACATTGGACTGCAAATCAACAAGGCATTGCAAATCAAGTTAACACTTTGGGGATGTACAACTTCTTTTGA 2439 0.3649 MNESSTPLAEDVGNLVDNIQKDIVEHGEESDVSYIPQLEMEFESEIAAYDFYNEYSKKVGFGIRREYGNKSKKDGILTSRRFVCFKEGNRGVDKRDYLTKEPRAETRTGCKARMCISLDRKIGKYKVVDFVPQHNHGLQPQEFVHMIRSHRRIYESQAFQIVLADESGLKPKDFHEYASKQVGGKESIGYTIQDHKNFLRTKIMQSLRYDEVGALLMHFKKQSENPSFFYEFQMDVEEQITNIFWADAQMINDYGYFGDVVTFDTTYKTNKDYRPLGVFVGLNNHRQTVVFGATLLYDETIPSFRWLFETFLKAMNAAMAKAISLTMPETFHALCTWHIRENALRHVNHLYQRSHKFCSDFEACIDLHEEESEFLSAWDGLLVEHNVPHDSWLHTIFRVKEKWAWAFVRKTFTAGMRSTQLSESFNADLKNHLKSDLNIVQFFTHFERVVNGKRSNESQADFESRHKLLRLKMKKAPMLVQAANVYTPKLFEEFQEEYEEYQGTCIQVLKEGFYIVTNYDNSKERKVTGSLVDQKVSCDCRKFETHGILCSHALKVLDAMNVKQIPEHYILKRWTRDARLGSNQDWKGQHIDLDIKAHFMKRYNELCPGMVKLTNRASESHETYSFLSKVYEESSKIVENMLAKNSMDEVSIGKRIVSISISAGEVESNLNTIDVGGAKGVKKRDCSYKAKRRPLSWVEKLEKMRKTNQHGTTNQHGTESLHGTAKKRKANQSKTKKKSKITMEPLALDCNSISLSQEHLIGITSQHGTTNQHGNASLQLNLSEYVDGSQHWTANQQGIANQVNTLGMYNFF* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2420 812 MobiDBLite consensus disorder prediction 704 740 - -
Mal4g2420 812 PANTHER OS03G0181600 PROTEIN 27 644 - -
Mal4g2420 812 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
Mal4g2420 812 Pfam MULE transposase domain 260 342 IPR018289 -
Mal4g2420 812 Pfam SWIM zinc finger 535 559 IPR007527 GO:0008270
Mal4g2420 812 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 644 IPR031052 GO:0006355
Mal4g2420 812 SMART 26again6 536 563 IPR006564 GO:0008270
Mal4g2420 812 ProSiteProfiles Zinc finger SWIM-type profile. 513 561 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2420 Mal-Chr4 62056221 62058778 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g2420 FAR1 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2420 - - cam:101500125 1113.21