Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2407 ATGGAACCTGAACAACAACCACTTCAACCACCAACCCTCACGGCGGTGCACGACGGAAGTGGCGATGAAGGTTTAGCCGCATTAGGAGAAGGCGGCGAAGCCAGCAACGGTAGCAAAGTTAAAGGACCTTGGTCTCCTGAAGAAGACGCCATTCTCAGCCATCTTGTTAGTCAGTTCGGTGCTAGAAACTGGAGTTTGATCGCTCGTGGAATCGCTGGAAGATCGGGGAAGTCGTGTCGGCTCCGGTGGTGTAATCAACTTGACCCTTCTGTTAAACGAAAACCCTTCACTGATGAGGAAGACCGGATCATAGTTGCTGCTCATGCAATCCATGGAAACAAATGGGCAGCCATTGCTAGGCTTCTGCCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTCTGAGGCGTCGGGGAGTTGAGCATGATAATACTAAGTTAGAATCTGGTAACATGGGGGGAAATATCAGCTTGGAGAAAGCCAAAGCCTCATCTGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGTTCTATGGAGATTGTGGATGGTAAAAATGAAGACAAAGCAAGGACTAATGTTCAATTATACCATGAAGTCAGGGATCCACTGACCCTTTTTAAGCCAGTAGCACGTGTAAGTGCTTTTAACGCGTATAATGCTTTCAATGGTTCACAGCCTTCAACATCAGTTCCAAGACCTGTTCCATTGCAAGGACCTATTTTACATTCACCAAAATCAGATATGGAAATTTGTAAAATGCTTAACGGAACTATTCTCGACCGGTCAGTGCCTAATCAGTGTGGTCATGGATGCTGTTCATCTCTAAATGGGAACAGCTCCAAAAGCTCTTTGTTGGGACCAGAATTCATTGAATATTCAGAACCTCAATCTTTCACAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGATACTGCTGGTAGGATTAATATTTAA 1053 0.4378 MEPEQQPLQPPTLTAVHDGSGDEGLAALGEGGEASNGSKVKGPWSPEEDAILSHLVSQFGARNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDNTKLESGNMGGNISLEKAKASSEETLSCGDVNSLKSSEGRDVSSMEIVDGKNEDKARTNVQLYHEVRDPLTLFKPVARVSAFNAYNAFNGSQPSTSVPRPVPLQGPILHSPKSDMEICKMLNGTILDRSVPNQCGHGCCSSLNGNSSKSSLLGPEFIEYSEPQSFTSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRINI* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2407 350 CDD SANT 43 85 IPR001005 -
Mal4g2407 350 Pfam Myb-like DNA-binding domain 44 101 - -
Mal4g2407 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Mal4g2407 350 PANTHER - 19 333 - -
Mal4g2407 350 MobiDBLite consensus disorder prediction 1 45 - -
Mal4g2407 350 CDD SANT 95 138 IPR001005 -
Mal4g2407 350 ProSiteProfiles Myb-like domain profile. 36 87 IPR001005 -
Mal4g2407 350 Gene3D - 40 92 - -
Mal4g2407 350 SMART sant 40 89 IPR001005 -
Mal4g2407 350 SMART sant 92 140 IPR001005 -
Mal4g2407 350 Gene3D - 95 141 - -
Mal4g2407 350 PANTHER MYB PROTEIN-RELATED 19 333 - -
Mal4g2407 350 SUPERFAMILY Homeodomain-like 39 134 IPR009057 -
Mal4g2407 350 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Mal4g2407 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 87 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2407 Mal-Chr4 61496389 61503969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2407 39 348 MYB Transcription Factor Family AT3G09230 50.617 3.70e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g2407 Myb_DNA-bind_6 4.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2407 K09422 - gmx:100811740 477.633