Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2402 ATGGCTCATCCATGGGTTCAAGAACTACATCTCAATCCCTTAACTGTTCCAGTTACAATCATCAACACATTTTCCGTTACTCCATCAAAGCCTATTCCTGTCAAACCAGGTGACAGTTTATATCTATCAAATCTCGATGACGTGATAGGAGCGCGCGTCTTCACACCGACAGTTTACTTTTATCAATCAGACAACTCAACCACTTCTTTCCAAAAACCAGTCATAGAAATACTTCGCCGTGCTCTAGCTGATGTTTTGGTTCCCTATTATCCTCTCTCAGGAAGGTTAAGAGAGACACAGAATGGTAAATTGGAAGTGTTTTTCGGAGAACAACAAGAAGAACAAGGAGCATTAATAGTTGAAGCAAGATCTAACATAGCATTATCTGAACTAGGTGATTTTGCAGCTCCAAATCCATCTTGGGAACCATTGATATTCAAATTCCCAAATGAAGAACAATACAAAGTGTTGGAAATGCCACTTGTTATAGCTCAGGTTACAATCTTCACATGTGGTGGATTTAGCCTCGGTTTACGCCTTTGTCATTGTATCTGTGATGGAATGGGAGCTATGCAGTTTCTAGGAGCATGGGCTGCAACAGCGAAAACAGGAACATTGGTAACAGAACCAGAACCCTGTTGGAACAGAGAGATTTTCAAGCCACGTGATCCACCAGAAGTGAAATTTCCACACATGGAGTTCATGAGAATTGATGAAGGATCAAACTTAACAATGAAACTATGGAAAACAAAGCCAGTTCAAAAGTGTTATCGAATAAAACGCGAGTTTCAAAACCAATTGAAATCACTTGCTCAGCCATTTGATGCTGCTGGTTGTACTACATTTGATGCAATGGCTGCACATATTTGGAGATCATGGGTTAAAGCTCTTGATGTGAAGCCACAAGATTACGAATTAAGGTTAACATTTTCGGTTAATGCTAGACAGAAGCTTAAAAATCCACCGTTGAAAGAAGGGTTTTATGGTAATGTGGTTTGTATTGCTTGCACAACAAGTAAGGTTTCTGATCTTATGAATGGGAAATTACCAGAGACTACCCTTTTGGTTCGCGAAGCTAGACAGAGTGTAACAGAGGAATATTTGAGATCAACTATTGATTATGTAGAGGTTGATAGGCCAAAACAACTTGAATTTGGTGGTAAACTTACAATAACTCAATGGACAAGATTTTCAATTTATAAATGTGCTGATTTTGGATGGGGTAAGCCAATTTATGCTGGTCCTATTGATTTAACACCTACACCTCAAGTTTGTGTATTTTTACCTGAAGGGGAAGGTGGTGATTGTAGTGATGGTTCTATGATTGTTTGCATTTGCTTACCTGAATCCGCAGCCAACAAGTTTACACAAGCCTTGTTGATTGATTCAGTGTTCTTGACATAG 1404 0.3917 MAHPWVQELHLNPLTVPVTIINTFSVTPSKPIPVKPGDSLYLSNLDDVIGARVFTPTVYFYQSDNSTTSFQKPVIEILRRALADVLVPYYPLSGRLRETQNGKLEVFFGEQQEEQGALIVEARSNIALSELGDFAAPNPSWEPLIFKFPNEEQYKVLEMPLVIAQVTIFTCGGFSLGLRLCHCICDGMGAMQFLGAWAATAKTGTLVTEPEPCWNREIFKPRDPPEVKFPHMEFMRIDEGSNLTMKLWKTKPVQKCYRIKREFQNQLKSLAQPFDAAGCTTFDAMAAHIWRSWVKALDVKPQDYELRLTFSVNARQKLKNPPLKEGFYGNVVCIACTTSKVSDLMNGKLPETTLLVREARQSVTEEYLRSTIDYVEVDRPKQLEFGGKLTITQWTRFSIYKCADFGWGKPIYAGPIDLTPTPQVCVFLPEGEGGDCSDGSMIVCICLPESAANKFTQALLIDSVFLT* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2402 467 Pfam Transferase family 17 457 - -
Mal4g2402 467 Gene3D - 241 459 IPR023213 -
Mal4g2402 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 460 - -
Mal4g2402 467 Gene3D - 15 236 IPR023213 -
Mal4g2402 467 PANTHER F21B7.2 12 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2402 Mal-Chr4 61338198 61339601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2402 21 460 Monolignol Biosynthesis Gene Families AT5G48930 30.599 1.35e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2402 K15400 - gmx:100802814 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2402 4 61338198 61339601 Mal4g2402 4 61338198 61339601 ECH