Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2359 ATGATGAACAAGATGAAGTTGAAGGTGGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATAAGAGGAGGAGTTTGAAGCTGGGGGATGAGGACCGTGATGATTTTGGCAATAGCGAAAGTCAGTATGTTGATGAATGTTCAGATTTAGGAGCAGATGCAAACAACTGCGATGATGATTCTGGAGGAGTTTCAAACGGTGTCAATGAATCAATATTTTCAGATGAAAATCCAGGCGAATCATTTGTAATTGATGATGTTGACGACATTGTAAAGATAGACATGTTTAGGTTGCAAATTGAAGATGTTTCGAAGTTTCAATTTGGAAGTCTAGAAGTTGCCTACAAATTTTACTGTTGTTTCGCAAAGATGAACGGTTTTGCTGTCCGGAAAGGTCAAGTTCTTAGAAATAAGAACGGAGATATTATTCAACAAACCTTTGTATGTAATCTAGAAGGCTTTAGGAAAGACAGAGGGTTAACTGCAGATGAACGTAAACGCGGGCCGAGACATGAAACTAGGTGTGGATGTGGAGCAAAATTTCGAGTGCATGTTGATATAAATTCACATCGTTGGTACATCACAGTTTTCAATTTCCAGCATAATCATGAAATGTTGAACGAGAAGCACTGCGGGTTGTTGGCTGCTCACAGGAAGCTGAGTAAGTCAGACAAGATTCAAATTAAGAATTTCGGCAATTCTGGTATTAAAGTTAATCAAATGATTGGTGCATTTGCAAATGCTGCTGGGGGGTATGATAAGGTTGGGTTTTTGAAGAGGGATGTTCATAATCAAATTCGTCGACAGAGAAGAGAGATGTCCTCTTATGCTAAAGGTGATGTTAGGTATTTGGTAGATATTCGCGTTAAAGATCCATTAATGTTTGTTGCACACATGGTTGGTGCGGATGGTAGGTTGCAAAACTTATTCTGGTGTGATGGTGAAAGTCAAAAGAACTACGAATTGTTTGGTGATGTGCTCGCTTTCGATGCCACATATAAGAAAAACAAGTACAGGTGCCCTTTTGTGGTTTTCTCTGGTGTTAATCACCATAACCAGACAATTATCTTTGCCACGGCCATAGTTTCAAATGAGGTTGAAGGGACATATGTATGGCTGTTGGAGCAGTTTTTGGCCACAATGAAAGGTAAGGCACCGATATCCGTAATAACGGACGACGATGTTGCTATGAGGAATGCAATCAGGAGGGTCTGTCACAAGAGTTATCATAGGTTATGTGCATGGCATCTTCTACGAAATGCAATTTCCAACATTTCTAATCCATATTTCATACCTTTTTTTAAAAGATGCATGCTTGGTGATCACGATGTTTGGAAATTTGAAAATCTATGGAAGGAAATGGTAGATAGGTTTGGTTTACAAGAAAATAGTTGGATCAAGGATTTGTACGAGAAAAAGACAAGTTGGGCAACATCTCATATTCAGGGACATTTCTTTGCAGGAATAAGAACGACATCTCGGTGCGAGGCATTTCACAGCCATATGGGTCATTTTGTACACTCGAAGATGAATATAACCGATTTTGTCAAGCAGTTCCATAGGTGTGTGTCATATTTTCGCTTTAGAGAGGTTGAAGCTAATTTTCAATCCCAATATGGAAAGGCGGTGTTGCAGACAAATCTTAGATCGCTTGAGAGGTCTGCTTCAAAACAGTTTACAAAAGAAATTTTTGAGTTGGTACGATCAGTTATTAAGAAGGTTTCCTTAATTTCATTATTAGATGTACAAGATATGTCATCCTTTTGGATTTATTCAGTGACAAAATACCGAGACGAAGGACATGTTTTTTGTGTTTGTCATAGTCCATCGGACGACGAATTTAACTGCTCTTGTCTTAGAATGGAATCTATTGGGATTCCCTGCGAGCATATTGTTGCTGTGCTGGTATATCTTGATATTGTTGATTTTCCCAAGTCTCTTGTGCTGAGTCGTTGGTCGTTGTTTGCGAAGGAATCGATTCGTGGACGTTATCCCGATGGTTCACACTACTGGGATTCACACTTGGTTGCTAGACATGCGAATTTGGTGAACCTGAGCTCAAATCGAAGTACGGGGACGGAGATGGTCCAGATAATGTACATGCTGCAGTGGATTCGGAAAATATACTTAATCCTTTATGTTCAAGAAGCAAGGGATGTGGACCAAGTACCAACGGTACAACCGGGAGAAGCAGGCGCGCACAAACGTGCAGTAGATGTGGTGCAGCTCGACACAACAGAAGATGTTGTCCTGCCAATGATGCAACTGGAGAACATGCTCTAG 2301 0.4016 MMNKMKLKVGKKKKKKKKKKKKKKKKNKRRSLKLGDEDRDDFGNSESQYVDECSDLGADANNCDDDSGGVSNGVNESIFSDENPGESFVIDDVDDIVKIDMFRLQIEDVSKFQFGSLEVAYKFYCCFAKMNGFAVRKGQVLRNKNGDIIQQTFVCNLEGFRKDRGLTADERKRGPRHETRCGCGAKFRVHVDINSHRWYITVFNFQHNHEMLNEKHCGLLAAHRKLSKSDKIQIKNFGNSGIKVNQMIGAFANAAGGYDKVGFLKRDVHNQIRRQRREMSSYAKGDVRYLVDIRVKDPLMFVAHMVGADGRLQNLFWCDGESQKNYELFGDVLAFDATYKKNKYRCPFVVFSGVNHHNQTIIFATAIVSNEVEGTYVWLLEQFLATMKGKAPISVITDDDVAMRNAIRRVCHKSYHRLCAWHLLRNAISNISNPYFIPFFKRCMLGDHDVWKFENLWKEMVDRFGLQENSWIKDLYEKKTSWATSHIQGHFFAGIRTTSRCEAFHSHMGHFVHSKMNITDFVKQFHRCVSYFRFREVEANFQSQYGKAVLQTNLRSLERSASKQFTKEIFELVRSVIKKVSLISLLDVQDMSSFWIYSVTKYRDEGHVFCVCHSPSDDEFNCSCLRMESIGIPCEHIVAVLVYLDIVDFPKSLVLSRWSLFAKESIRGRYPDGSHYWDSHLVARHANLVNLSSNRSTGTEMVQIMYMLQWIRKIYLILYVQEARDVDQVPTVQPGEAGAHKRAVDVVQLDTTEDVVLPMMQLENML* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2359 766 Pfam SWIM zinc finger 621 643 IPR007527 GO:0008270
Mal4g2359 766 Pfam FAR1 DNA-binding domain 122 212 IPR004330 -
Mal4g2359 766 Coils Coil 11 31 - -
Mal4g2359 766 MobiDBLite consensus disorder prediction 1 30 - -
Mal4g2359 766 MobiDBLite consensus disorder prediction 1 46 - -
Mal4g2359 766 PANTHER OS02G0262500 PROTEIN 109 697 - -
Mal4g2359 766 SMART 26again6 620 647 IPR006564 GO:0008270
Mal4g2359 766 MobiDBLite consensus disorder prediction 31 46 - -
Mal4g2359 766 ProSiteProfiles Zinc finger SWIM-type profile. 597 645 IPR007527 GO:0008270
Mal4g2359 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 109 697 IPR031052 GO:0006355
Mal4g2359 766 Pfam MULE transposase domain 332 426 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2359 Mal-Chr4 59382580 59384962 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g2359 MULE 2.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2359 - - ccaj:109791994 593.578