Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2348 ATGGATGGGAACAAAGACGACGCATTGAAATCATTGAAAATCGGTAAAGAAGCTTTGGAAAAAGGAGATCGTAATCGCGCTTTGAAGTTTCTTAACAAAGCTCGCCGCCTCGATCCGACGCTTCCAATTGACGATCTGCTGTCTACTATAGACACCGATGCAGGTGATCATCCGCCATCAGCTGCCGAGCCAGCGAAGAATTCATCCGATCAGCCTTCAATTCGTCGAAGGTCATCTGCTCCGACGCCAGGGCCTTCGTCGTCATCCTCGGTGTCTTACAGCGAGGAGCAAGTTTCAATTGTAAGAGAAATTAAGAGGAAGAAGAATTATTATGATATTTTAGGGTTGGAGAAGAGTTGCACGGTGGATGATGTGCGAAAATCGTATAGGAAGCTGTCTTTGAAGGTTCATCCGGATAAGAACAAAGCTCCCGGAGCGGAGGAAGCTTTTAAGTCGGTGTCCAAGGCTTTTCAGTGTCTGGGTAATGAGGAGAGTAAGAGAAAGTATGATGTTTCTGGAGAAGATGAAGTTGTTTATGAAAGGCGCGCTGCTGCGAGACCGGCTAGAGGATTTAATGGTTACTATGAAGCTGATGTTGATGCTGAAGAAATATTTAGGAATTTCTTCTTTGGAGGAATGGGAGGAATGGCGCCTGCTGGGAATTTCGGGTTTAGTTTTGGTGGACCGGGGATGGCTCATCGACAGGCTGCTGCTGATAATGGTTCCGGTGGGTTCAATGTTCGTGCTTTGATTCAGTTGCTTCCGGTGCTTCTGATTTTGCTTATTAATTTTTTGCCTTCGTCGGATCCGGTGTATGTTCTTTCTCGGAACTATCCTTATGAACACCAGCTTACTACGCCTAAGGGTGTTAACTACTATGTTAAGTCTACGAAGTTTGAGCAAGATTATCCGTTTGATAGCCGCGAACGTGCTACGATTGAGGAAAGGGTTGAGAGAGAATACTTTGGTATTCTTCGCCAGAATTGTCAGTTTGAGTTGCAGCGACGCCAGTGGGGATATATTCGGGAAACCCCTCACTGTGATATGCTTCGGCAGTTTGATTTGGTCCGTTGA 1074 0.459 MDGNKDDALKSLKIGKEALEKGDRNRALKFLNKARRLDPTLPIDDLLSTIDTDAGDHPPSAAEPAKNSSDQPSIRRRSSAPTPGPSSSSSVSYSEEQVSIVREIKRKKNYYDILGLEKSCTVDDVRKSYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLGNEESKRKYDVSGEDEVVYERRAAARPARGFNGYYEADVDAEEIFRNFFFGGMGGMAPAGNFGFSFGGPGMAHRQAAADNGSGGFNVRALIQLLPVLLILLINFLPSSDPVYVLSRNYPYEHQLTTPKGVNYYVKSTKFEQDYPFDSRERATIEERVEREYFGILRQNCQFELQRRQWGYIRETPHCDMLRQFDLVR* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2348 357 SUPERFAMILY Chaperone J-domain 105 224 IPR036869 -
Mal4g2348 357 MobiDBLite consensus disorder prediction 64 95 - -
Mal4g2348 357 ProSiteProfiles dnaJ domain profile. 109 173 IPR001623 -
Mal4g2348 357 MobiDBLite consensus disorder prediction 46 95 - -
Mal4g2348 357 PANTHER - 1 354 - -
Mal4g2348 357 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Mal4g2348 357 ProSiteProfiles TPR repeat profile. 8 41 IPR019734 GO:0005515
Mal4g2348 357 Pfam Domain of unknown function (DUF1977) 266 337 IPR015399 -
Mal4g2348 357 PRINTS DnaJ domain signature 129 144 IPR001623 -
Mal4g2348 357 PRINTS DnaJ domain signature 145 165 IPR001623 -
Mal4g2348 357 PRINTS DnaJ domain signature 111 129 IPR001623 -
Mal4g2348 357 Pfam DnaJ domain 109 170 IPR001623 -
Mal4g2348 357 Gene3D DnaJ domain 105 219 IPR036869 -
Mal4g2348 357 PANTHER AT29763P-RELATED 1 354 - -
Mal4g2348 357 CDD DnaJ 109 162 IPR001623 -
Mal4g2348 357 SMART dnaj_3 108 165 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2348 Mal-Chr4 58600966 58602039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2348 4 181 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 26.230 1.08e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2348 K09518 - gmx:100793797 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2348 4 58600966 58602039 Mal4g2348 4 58600966 58602039 ECH