Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2335 ATGGAGCAACAACGTCATGTAGGAGAAATTGTTGATGATGGTATAGTGTTGACCTTTCATTGGAATTCTATTAGAAATTCTTATGAAATGTACCGACATATGAGGGATGACAACCAAGCTCCGCATATTGAGGATTGGGACAAGCGTCTTTATATGGGACACCTCATTTTCCGTGAAAACAATAACTTAAGTGAGCGTTTAAGAAGAGGAAACCCTGTAAGTAGTAGGATTGAAGATGGAGCACCAGGTTCTACCTGTTCCATATGTCTTGAAGATATTTCTGTTGGTTCTGAAGTGATTCAACTGCCCAACCCGTGTTGTCATGTTTATCATGAAGAATGCATTATGAGGTGGCTCGACAGGTCTAACAGTTGCCCTTTGTGTCATAGGCCTATCTCATAA 402 0.4055 MEQQRHVGEIVDDGIVLTFHWNSIRNSYEMYRHMRDDNQAPHIEDWDKRLYMGHLIFRENNNLSERLRRGNPVSSRIEDGAPGSTCSICLEDISVGSEVIQLPNPCCHVYHEECIMRWLDRSNSCPLCHRPIS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2335 133 Pfam Ring finger domain 85 128 IPR001841 -
Mal4g2335 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 133 IPR013083 -
Mal4g2335 133 SMART ringv_2 85 129 IPR011016 GO:0008270
Mal4g2335 133 SUPERFAMILY RING/U-box 85 132 - -
Mal4g2335 133 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Mal4g2335 133 SMART ring_2 86 128 IPR001841 -
Mal4g2335 133 PANTHER SI:CH211-59O9.10 73 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2335 Mal-Chr4 58124772 58125173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2335 76 130 C3H Transcription Factor Family AT5G66070 50.000 1.00e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2335 - K22378 cam:101490108 154.451